RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ANLNQ9NQW6 1124 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SMPD4Q9NXE4 827 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 TLR6Q9Y2C9 796 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 CPQQ9Y646 472 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 ALG6Q9Y672 507 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SLC12A8A0AV02 714 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 IL1R2P27930 398 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 MIPP30301 263 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 CXCR3P49682 368 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 SMAD4Q13485 552 aaKnown RBP22.16■■□□□ 1.14
CBWD3-202ENST00000377342 HLA-CQ95604 372 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.16■■□□□ 1.14
CBWD3-202ENST00000377342 ARHGAP26Q9UNA1 814 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 CCL26Q9Y258 94 aa22.16■■□□□ 1.14
CBWD3-202ENST00000377342 HBS1LQ9Y450 684 aaKnown RBP22.16■■□□□ 1.14
CBWD3-202ENST00000377342 RNF8O76064 485 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 FTCDO95954 541 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 PCK1P35558 622 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 KCNQ1P51787 676 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 TBX4P57082 545 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 TXNRD3NBQ6F5E7 133 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 CC2D1AQ6P1N0 951 aaPredicted RBP22.15■■□□□ 1.14
CBWD3-202ENST00000377342 CCDC185Q8N715 623 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 TRIM58Q8NG06 486 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 MAFAQ8NHW3 353 aaPredicted RBP22.15■■□□□ 1.14
CBWD3-202ENST00000377342 RIN3Q8TB24 985 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 CD101Q93033 1021 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 NECTIN4Q96NY8 510 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 MYADMQ96S97 322 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 GKN1Q9NS71 199 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 ZMYM5Q9UJ78 669 aa22.15■■□□□ 1.14
CBWD3-202ENST00000377342 MBTPS2O43462 519 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 F9P00740 461 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 HMBSP08397 361 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 GBP1P32455 592 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 SLC1A1P43005 524 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 RING1Q06587 406 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 ZC3H12AQ5D1E8 599 aaKnown RBP22.14■■□□□ 1.14
CBWD3-202ENST00000377342 NT5DC3Q86UY8 548 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 ZSCAN18Q8TBC5 510 aaPredicted RBP22.14■■□□□ 1.14
CBWD3-202ENST00000377342 USP13Q92995 863 aaPredicted RBP22.14■■□□□ 1.14
CBWD3-202ENST00000377342 ALS2CR12Q96Q35 445 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 TMPRSS4Q9NRS4 437 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 CDH7Q9ULB5 785 aa22.14■■□□□ 1.14
CBWD3-202ENST00000377342 SPOPO43791 374 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 GREM1O60565 184 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 STC2O76061 302 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 AVPR1AP37288 418 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 SYCE1Q8N0S2 351 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 ARHGEF38Q9NXL2 777 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 PCSK1NQ9UHG2 260 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 USP18Q9UMW8 372 aa22.14■■□□□ 1.13
CBWD3-202ENST00000377342 FANCGO15287 622 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 KIF5CO60282 957 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 IRF1P10914 325 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 DESP17661 470 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 WEE1P30291 646 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 MARCKSL1P49006 195 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 PPP2R5DQ14738 602 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 FAM78AQ5JUQ0 283 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 ZNF569Q5MCW4 686 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 SCYL2Q6P3W7 929 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 NYAP1Q6ZVC0 841 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 ARID3BQ8IVW6 561 aaPredicted RBP22.13■■□□□ 1.13
CBWD3-202ENST00000377342 SLC35F6Q8N357 371 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 PLD4Q96BZ4 506 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 ASB16Q96NS5 453 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 GDE1Q9NZC3 331 aa22.13■■□□□ 1.13
CBWD3-202ENST00000377342 XPO7Q9UIA9 1087 aaKnown RBP22.13■■□□□ 1.13
CBWD3-202ENST00000377342 PACSIN2Q9UNF0 486 aaPredicted RBP22.13■■□□□ 1.13
CBWD3-202ENST00000377342 KCNU1A8MYU2 1149 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 FCARP24071 287 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 CCR1P32246 355 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 COG7P83436 770 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 USP4Q13107 963 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 LEXMQ3ZCV2 418 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 BRMS1LQ5PSV4 323 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 KRT35Q92764 455 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 NTAN1Q96AB6 310 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 RSPRY1Q96DX4 576 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 SNRNP25Q9BV90 132 aaKnown RBP22.12■■□□□ 1.13
CBWD3-202ENST00000377342 PRDM6Q9NQX0 595 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 TDP1Q9NUW8 608 aa22.12■■□□□ 1.13
CBWD3-202ENST00000377342 LEFTY2O00292 366 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 KLKB1P03952 638 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 KPNA1P52294 538 aaPredicted RBP22.11■■□□□ 1.13
CBWD3-202ENST00000377342 SMTNL2Q2TAL5 461 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 PEX26Q7Z412 305 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 ACSF2Q96CM8 615 aaPredicted RBP22.11■■□□□ 1.13
CBWD3-202ENST00000377342 WDR24Q96S15 920 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 NCAPGQ9BPX3 1015 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 TKTL2Q9H0I9 626 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 WDCPQ9H6R7 721 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.11■■□□□ 1.13
CBWD3-202ENST00000377342 PRPSAP2O60256 369 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 CTNNA1P35221 906 aaKnown RBP22.11■■□□□ 1.13
CBWD3-202ENST00000377342 GJC1P36383 396 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 SSR1P43307 286 aaKnown RBP22.11■■□□□ 1.13
CBWD3-202ENST00000377342 SCAPQ12770 1279 aa22.11■■□□□ 1.13
CBWD3-202ENST00000377342 ZNF77Q15935 545 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms