RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 SIX2Q9NPC8 291 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 TRNAU1APQ9NX07 287 aaKnown RBP9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 PPM1HQ9ULR3 514 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 PLA2G4CQ9UP65 541 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 CYP3A7-CYP3A51PA0A087WV96 503 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 A0A096LPK6 155 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 ADAMTS3O15072 1205 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 SNX2O60749 519 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 CCNA2P20248 432 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 KDELR1P24390 212 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 CYP3A7P24462 503 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 RARRES1P49788 294 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 TNFAIP2Q03169 654 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 CAPRIN1Q14444 709 aaKnown RBP9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 C6orf52Q5T4I8 152 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 RSBN1Q5VWQ0 802 aaPredicted RBP9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 CDC42EP5Q6NZY7 148 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 ERO1BQ86YB8 467 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 TSPAN17Q96FV3 270 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 ACOT9Q9Y305 439 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 GMEB1Q9Y692 573 aa9.31□□□□□ -0.92
CRNKL1-201ENST00000377327 CLTCQ00610 1675 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 hCG_1818297A0A087WSY0 165 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 DYTNA2CJ06 578 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 TRIM43BA6NCK2 446 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 POLRMTO00411 1230 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 CNOT3O75175 753 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 DDHD2O94830 711 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MFN2O95140 757 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 HPCAP84074 193 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 NME3Q13232 169 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MPP3Q13368 585 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 NFIXQ14938 502 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 SLC15A2Q16348 729 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 NADK2Q4G0N4 442 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 ANGEL2Q5VTE6 544 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 ZBTB46Q86UZ6 589 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 BANPQ8N9N5 519 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 FAM47BQ8NA70 645 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 ACMSDQ8TDX5 336 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 SLC7A6OSQ96CW6 309 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MBOAT7Q96N66 472 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 RTKNQ9BST9 563 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 ADAM7Q9H2U9 754 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 CISHQ9NSE2 258 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 SLC8A2Q9UPR5 921 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 POMPQ9Y244 141 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 TRAFD1O14545 582 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MRASO14807 208 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 ZNF12P17014 697 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 CHRNB3Q05901 458 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 KLHDC10Q6PID8 442 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 BBS12Q6ZW61 710 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 KRT27Q7Z3Y8 459 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 CCDC126Q96EE4 140 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 FAM167AQ96KS9 214 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MTG1Q9BT17 334 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 BDH2Q9BUT1 245 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 IKZF4Q9H2S9 585 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 EPS8L2Q9H6S3 715 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 GPATCH2LQ9NWQ4 482 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 TRIM17Q9Y577 477 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 GOLGA8TH3BQL2 631 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 TRIM38O00635 465 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 SIN3BO75182 1162 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 LYPLA1O75608 230 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 LDLRP01130 860 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MPOP05164 745 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 EIF2S1P05198 315 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 MSX2P35548 267 aaPredicted RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 GABRB2P47870 512 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 RPL14P50914 215 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 PRKAA2P54646 552 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 LAMC2Q13753 1193 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 TMTC4Q5T4D3 741 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 PPHLN1Q8NEY8 458 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 RAD21L1Q9H4I0 556 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 DHX33Q9H6R0 707 aaKnown RBP9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 TRPC7Q9HCX4 862 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 COQ6Q9Y2Z9 468 aa9.3□□□□□ -0.92
CRNKL1-201ENST00000377327 WDR27A2RRH5 827 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 INPP4BO15327 924 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 SUPT7LO94864 414 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 WDR47O94967 919 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 PIGNO95427 931 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 PABPC4LP0CB38 370 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 RPL7AP62424 266 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 NSUN2Q08J23 767 aaKnown RBP eCLIP9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 KLF10Q13118 480 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 LSAMPQ13449 338 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 FASTKQ14296 549 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 EMC2Q15006 297 aa9.29□□□□□ -0.92
CRNKL1-201ENST00000377327 RALGPS1Q5JS13 557 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms