RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TMEM86AQ8N2M4 240 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 TFB1MQ8WVM0 346 aaKnown RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 PLCD4Q9BRC7 762 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 POPDC2Q9HBU9 364 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 XPNPEP3Q9NQH7 507 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 GGT7Q9UJ14 662 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 GRID1Q9ULK0 1009 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 TMEM88BA6NKF7 163 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 GOLGA8RI6L899 631 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 METTL18O95568 372 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 PDK4Q16654 411 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 LVRNQ6Q4G3 990 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 SERINC5Q86VE9 423 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 LRRC8CQ8TDW0 803 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 MZB1Q8WU39 189 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 NPY6RQ99463 290 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 CAPN9O14815 690 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 AP1G2O75843 785 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 ELNP15502 786 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 HNRNPH1P31943 449 aaKnown RBP20.92■□□□□ 0.94
VSX1-202ENST00000376709 SCNN1GP51170 649 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 DEUP1Q05D60 604 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 FAM133BQ5BKY9 247 aaKnown RBP20.92■□□□□ 0.94
VSX1-202ENST00000376709 OTUD1Q5VV17 481 aaPredicted RBP20.92■□□□□ 0.94
VSX1-202ENST00000376709 SYPL2Q5VXT5 272 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 MCUQ8NE86 351 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 SLC44A1Q8WWI5 657 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 SPOCK2Q92563 424 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 NT5C3BQ969T7 300 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 ALKBH8Q96BT7 664 aaKnown RBP20.92■□□□□ 0.94
VSX1-202ENST00000376709 KLF6Q99612 283 aaPredicted RBP20.92■□□□□ 0.94
VSX1-202ENST00000376709 ARHGEF4Q9NR80 690 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 TMPRSS4Q9NRS4 437 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 KLHL14Q9P2G3 628 aa20.92■□□□□ 0.94
VSX1-202ENST00000376709 CASTOR2A6NHX0 329 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 H3BRJ5 948 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 GPR182O15218 404 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 CREB3O43889 395 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 AOC2O75106 756 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 MT-ND3P03897 115 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 ASGR1P07306 291 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 IBSPP21815 317 aaPredicted RBP20.91■□□□□ 0.94
VSX1-202ENST00000376709 KCNA10Q16322 511 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 CGB2Q6NT52 195 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 CTAGE3PQ8IX95 158 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 RNF139Q8WU17 664 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 HTR3CQ8WXA8 447 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 PCED1BQ96HM7 432 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 OLFM3Q96PB7 478 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 MIOSQ9NXC5 875 aa20.91■□□□□ 0.94
VSX1-202ENST00000376709 RABGGTBP53611 331 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 CBLBQ13191 982 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 HFE2Q6ZVN8 426 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 FAM35AQ86V20 835 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 CCDC63Q8NA47 563 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 RNF169Q8NCN4 708 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 C3orf58Q8NDZ4 430 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 LRRC39Q96DD0 335 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 SLC2A13Q96QE2 648 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 LGMNQ99538 433 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 ULBP1Q9BZM6 244 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 SLC40A1Q9NP59 571 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 PNPLA8Q9NP80 782 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 PHTF1Q9UMS5 762 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 SLC12A4Q9UP95 1085 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 GIT1Q9Y2X7 761 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 ZNF638Q14966 1978 aaKnown RBP20.9■□□□□ 0.94
VSX1-202ENST00000376709 MYBPHLA2RUH7 354 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 HACD1B0YJ81 288 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 MFSD11O43934 449 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 FBXO21O94952 628 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 ALDH1A1P00352 501 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 GSTA1P08263 222 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 PRKAR2AP13861 404 aaKnown RBP20.9■□□□□ 0.94
VSX1-202ENST00000376709 RGS9BPQ6ZS82 235 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 PRPF39Q86UA1 669 aaKnown RBP20.9■□□□□ 0.94
VSX1-202ENST00000376709 SLC7A14Q8TBB6 771 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 TCP10LQ8TDR4 215 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 HHIPL1Q96JK4 782 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 KCNK16Q96T55 309 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 PIGVQ9NUD9 493 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 HAUS2Q9NVX0 235 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 PRKAG3Q9UGI9 489 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 TTLL3Q9Y4R7 772 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 NR2E3Q9Y5X4 410 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 MAD1L1Q9Y6D9 718 aa20.9■□□□□ 0.94
VSX1-202ENST00000376709 NRP1O14786 923 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 TM9SF1O15321 606 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 DGKIO75912 1065 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 TPSB2P20231 275 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 THPOP40225 353 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 MGAT3Q09327 533 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 TPSAB1Q15661 275 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 AGMOQ6ZNB7 445 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 DENND5BQ6ZUT9 1274 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 PPM1NQ8N819 430 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 BANPQ8N9N5 519 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 AGO3Q9H9G7 860 aaKnown RBP20.89■□□□□ 0.94
VSX1-202ENST00000376709 PRDM16Q9HAZ2 1276 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 RNF186Q9NXI6 227 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms