RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 FOXO6A8MYZ6 492 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 MFSD11O43934 449 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 VNN2O95498 520 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 ATP1A2P50993 1020 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 RNASEH2BQ5TBB1 312 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 CCDC110Q8TBZ0 833 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 EPS8L3Q8TE67 593 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 TRIM43Q96BQ3 446 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 FAF2Q96CS3 445 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 LGMNQ99538 433 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 SEZ6LQ9BYH1 1024 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 TKTL2Q9H0I9 626 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 USP29Q9HBJ7 922 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 CLTBP09497 229 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 RARGP13631 454 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 FGFR3P22607 806 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 GBP1P32455 592 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 ARL4AP40617 200 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 IKBKEQ14164 716 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 TERF2Q15554 542 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 SPOUT1Q5T280 376 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 KCNT2Q6UVM3 1135 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 DCP1BQ8IZD4 617 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 CPT1BQ92523 772 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 CASP10Q92851 521 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 RBM15Q96T37 977 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 SIK2Q9H0K1 926 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 CDY1Q9Y6F8 540 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 SF3B1O75533 1304 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■■■ 93.8
CLCN6-206ENST00000376496 ARHGEF37A1IGU5 675 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 SYN3O14994 580 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 PIAS1O75925 651 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 TMEM63AO94886 807 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 HPDP32754 393 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-206ENST00000376496 DUSP4Q13115 394 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 MGAT5BQ3V5L5 792 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 EFHC2Q5JST6 749 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 ZNF280DQ6N043 979 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 ANKMY2Q8IV38 441 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 GIPC2Q8TF65 315 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 TOX2Q96NM4 488 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 TMBIM4Q9HC24 238 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 NINJ2Q9NZG7 142 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
CLCN6-206ENST00000376496 PCDHB5Q9Y5E4 795 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 MYO16Q9Y6X6 1858 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 EEF2KO00418 725 aaKnown RBP13.05□□□□□ -0.32
CLCN6-206ENST00000376496 TBX18O95935 607 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
CLCN6-206ENST00000376496 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 BTBD8Q5XKL5 378 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 FBXO46Q6PJ61 603 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-206ENST00000376496 CCDC13Q8IYE1 715 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 PRCCQ92733 491 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-206ENST00000376496 WDCPQ9H6R7 721 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
CLCN6-206ENST00000376496 CSPG5O95196 566 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 MOCS2O96007 188 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-206ENST00000376496 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 TGM2P21980 687 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 GJA8P48165 433 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 ALDH7A1P49419 539 aaKnown RBP13.04□□□□□ -0.32
CLCN6-206ENST00000376496 SLMAPQ14BN4 828 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 LONRF1Q17RB8 773 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 FNBP1LQ5T0N5 605 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 NUP205Q92621 2012 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 C11orf49Q9H6J7 331 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 GMIPQ9P107 970 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
CLCN6-206ENST00000376496 MTMR11A4FU01 709 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 GOLGA8KD6RF30 607 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 DGKIO75912 1065 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
CLCN6-206ENST00000376496 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 RFX8Q6ZV50 586 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 DNAJC5GQ8N7S2 189 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 TTPALQ9BTX7 342 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 CWH43Q9H720 699 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 CTNNAL1Q9UBT7 734 aa13.04□□□□□ -0.32
CLCN6-206ENST00000376496 NOVA2Q9UNW9 492 aaKnown RBP13.04□□□□□ -0.32
CLCN6-206ENST00000376496 AVILO75366 819 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 VAV1P15498 845 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 PAX3P23760 479 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 CNKSR3Q6P9H4 555 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 OTOP2Q7RTS6 562 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 ZCCHC9Q8N567 271 aaKnown RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 ATP6V1G3Q96LB4 118 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 RABEP2Q9H5N1 569 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms