RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 IL4RP24394 825 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 RPL10AP62906 217 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 PEX6Q13608 980 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 HIC1Q14526 733 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 FASTKD1Q53R41 847 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ATG14Q6ZNE5 492 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 RSPH3Q86UC2 560 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 TMEM192Q8IY95 271 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 SLC4A11Q8NBS3 891 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 SLC26A7Q8TE54 656 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 RXFP2Q8WXD0 754 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 CCDC124Q96CT7 223 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ACO2Q99798 780 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 GORASP1Q9BQQ3 440 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 XAB2Q9HCS7 855 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ASNSD1Q9NWL6 643 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 CPSF3Q9UKF6 684 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ADAMTS6Q9UKP5 1117 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 SOX13Q9UN79 622 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 DNAJC16Q9Y2G8 782 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 M0QYV0 167 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 OGTO15294 1046 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 KRT38O76015 456 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ENDOD1O94919 500 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 KCNA4P22459 653 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ZNF157P51786 506 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 TUBB3Q13509 450 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 KRT81Q14533 505 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ZPBP2Q6X784 338 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 EGFL6Q8IUX8 553 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 PPP2R3CQ969Q6 453 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 MCRS1Q96EZ8 462 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 CDHR1Q96JP9 859 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 PCYT2Q99447 389 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 SPATA16Q9BXB7 569 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 MRPL4Q9BYD3 311 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ELOVL4Q9GZR5 314 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 CYP4F11Q9HBI6 524 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 NR2E3Q9Y5X4 410 aa14.59□□□□□ -0.07
CLCNKA-202ENST00000375692 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 TRDMT1O14717 391 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 MED7O43513 233 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 METTL18O95568 372 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 ZBED1O96006 694 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 GSRP00390 522 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 PDGFRAP16234 1089 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 CRHR1P34998 444 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 GMPRP36959 345 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 WASHC5Q12768 1159 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 ASPHQ12797 758 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 LIN52Q52LA3 116 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 EFHC1Q5JVL4 640 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 PQLC3Q8N755 202 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 FAM172AQ8WUF8 416 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 AZIN2Q96A70 460 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 GPAMQ9HCL2 828 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 THAP1Q9NVV9 213 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 AOC1P19801 751 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 ADORA2AP29274 412 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 CDK7P50613 346 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 ZNF143P52747 638 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 BCAR1P56945 870 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 TFDP2Q14188 446 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 CA9Q16790 459 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 VWA5B1Q5TIE3 1220 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 KYAT3Q6YP21 454 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 SAPCD2Q86UD0 394 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 PDSS2Q86YH6 399 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 LRRC71Q8N4P6 559 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 OR6Y1Q8NGX8 325 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 SIGLEC10Q96LC7 697 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 NIFKQ9BYG3 293 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 KLC2Q9H0B6 622 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 C1orf21Q9H246 121 aa14.58□□□□□ -0.08
CLCNKA-202ENST00000375692 LOC100653049A0A140TA62 436 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 OPHN1O60890 802 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 FKBP6O75344 327 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 KRT34O76011 436 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 TNNC2P02585 160 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PROCP04070 461 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 GJB1P08034 283 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PTPN11Q06124 597 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 MSLNQ13421 630 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 CUL3Q13618 768 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 CCNIQ14094 377 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 DHDDSQ86SQ9 333 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PCDH19Q8TAB3 1148 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 DEPDC1BQ8WUY9 529 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PNPOQ9NVS9 261 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PIH1D1Q9NWS0 290 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 DNAJB4Q9UDY4 337 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 SIX4Q9UIU6 781 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 UNCXA6NJT0 531 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 B4GALT5O43286 388 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PRPSAP2O60256 369 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 ZMPSTE24O75844 475 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 PRKCBP05771 671 aa14.57□□□□□ -0.08
CLCNKA-202ENST00000375692 GPD1P21695 349 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms