RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 BLOC1S5Q8TDH9 187 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CCDC3Q9BQI4 270 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SAR1AQ9NR31 198 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 BCORL1Q5H9F3 1711 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RAP1GAPP47736 663 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 DPYDQ12882 1025 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 ATP1A4Q13733 1029 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 A0A088AWK7 358 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 USP27XA6NNY8 438 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 RHOBTB3O94955 611 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 VAV1P15498 845 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 TCF4P15884 667 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF10P21506 573 aaPredicted RBP8.59□□□□□ -1.04
HSPG2-203ENST00000374695 POU1F1P28069 291 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 KPNA1P52294 538 aaPredicted RBP8.59□□□□□ -1.04
HSPG2-203ENST00000374695 GRIK3Q13003 919 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 GOLGA7BQ2TAP0 167 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 ERFEQ4G0M1 354 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF605Q86T29 641 aa8.59□□□□□ -1.04
HSPG2-203ENST00000374695 LOC100653049A0A140TA62 436 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 CST8O60676 142 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TMEM120AQ9BXJ8 343 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZCCHC2Q9C0B9 1178 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TEX46H3BTG2 121 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 FESP07332 822 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ITGADQ13349 1161 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SGMS1Q86VZ5 419 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ASCC3Q8N3C0 2202 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP6P35125 1406 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 KIF28PB7ZC32 967 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 RAD17O75943 681 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 PIK3CGP48736 1102 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ERFP50548 548 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TAF13Q15543 124 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SMTNL2Q2TAL5 461 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TKFCQ3LXA3 575 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 RNF149Q8NC42 400 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SERAC1Q96JX3 654 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 DSN1Q9H410 356 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF112Q9UJU3 913 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 CCDC154A6NI56 674 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TPST1O60507 370 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF12P17014 697 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF177Q13360 481 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 MINDY2Q8NBR6 621 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 PUS3Q9BZE2 481 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 PLGRKTQ9HBL7 147 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TRPC4Q9UBN4 977 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 FAM92AA1XBS5 289 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 RBP3P10745 1247 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ITGALP20701 1170 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SMCO1Q147U7 214 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 PM20D2Q8IYS1 436 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 OR7A2PQ8NGA2 310 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 NSMCE2Q96MF7 247 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 GPR101Q96P66 508 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 H7C4K7 107 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 IDH3BO43837 385 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 LDLRP01130 860 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 CCZ1BP86790 482 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 CCZ1P86791 482 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 MAPK11Q15759 364 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 CYLDQ9NQC7 956 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SORCS3Q9UPU3 1222 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 PNPLA7Q6ZV29 1317 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 GSAPA4D1B5 854 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 F5H5T6 163 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ADCY6O43306 1168 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ATP9AO75110 1047 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 HSF2Q03933 536 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 KDELC2Q7Z4H8 507 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 C1orf131Q8NDD1 294 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 MASTLQ96GX5 879 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 AFF2P51816 1311 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF335Q9H4Z2 1342 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZC3H11AO75152 810 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■■□□ 16.9
HSPG2-203ENST00000374695 CRABP2P29373 138 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ATN1P54259 1190 aaPredicted RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 MCL1Q07820 350 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 CXXC5Q7LFL8 322 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 HERC6Q8IVU3 1022 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 REEP1Q9H902 201 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 DBNDD1Q9H9R9 158 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 KIAA1257Q9ULG3 409 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 A0A0B4J269 797 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 A0A0X1KG70 313 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TUBB3Q13509 450 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TMEM63BQ5T3F8 832 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 OR52L1Q8NGH7 329 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ATXN2LQ8WWM7 1075 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 NCAM1P13591 858 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms