RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CYLDQ9NQC7 956 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 SLC5A4Q9NY91 659 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 PPARGC1AQ9UBK2 798 aaKnown RBP17.63■□□□□ 0.41
RXRB-201ENST00000374680 KIAA1257Q9ULG3 409 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 C2CD2LO14523 706 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 NDC80O14777 642 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 MFSD11O43934 449 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 SKAP2O75563 359 aaPredicted RBP17.63■□□□□ 0.41
RXRB-201ENST00000374680 MGAT1P26572 445 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 ELF1P32519 619 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 NUMBP49757 651 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 MAP3K7CLP57077 242 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 KDSRQ06136 332 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 NOTUMQ6P988 496 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 DSTYKQ6XUX3 929 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 COLGALT1Q8NBJ5 622 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 BRI3BPQ8WY22 251 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 RILPQ96NA2 401 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 RAB3IPQ96QF0 476 aaPredicted RBP17.63■□□□□ 0.41
RXRB-201ENST00000374680 TINF2Q9BSI4 451 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 SHCBP1LQ9BZQ2 653 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 NMUR2Q9GZQ4 415 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 CXorf56Q9H5V9 222 aa17.63■□□□□ 0.41
RXRB-201ENST00000374680 M0QYT0 321 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 LYPLA1O75608 230 aaPredicted RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 RFPL1O75677 317 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ENO1P06733 434 aaKnown RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 TGM2P21980 687 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 KCNA4P22459 653 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 NEK3P51956 506 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 IFRD2Q12894 506 aaPredicted RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 RIPK1Q13546 671 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 SLC45A4Q5BKX6 768 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 PPM1JQ5JR12 505 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ZNF534Q76KX8 674 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 OSTM1Q86WC4 334 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 RNF169Q8NCN4 708 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.62■□□□□ 0.419e-6■■■■□ 24.8
RXRB-201ENST00000374680 UBP1Q9NZI7 540 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 C15orf41Q9Y2V0 281 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 PSAT1Q9Y617 370 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 GOLGA8TH3BQL2 631 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 MYL3P08590 195 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ARL4AP40617 200 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 GSCP56915 257 aaPredicted RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 BST2Q10589 180 aaKnown RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 ANKRD20A2Q5SQ80 823 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ANKRD20A1Q5TYW2 823 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 WSCD1Q658N2 575 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 TWF2Q6IBS0 349 aaKnown RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 RGS9BPQ6ZS82 235 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ANKRD52Q8NB46 1076 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 FBXO27Q8NI29 283 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 ALKBH8Q96BT7 664 aaKnown RBP17.62■□□□□ 0.41
RXRB-201ENST00000374680 MOCOSQ96EN8 888 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 KATNBL1Q9H079 304 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 LRMDAQ9H2I8 198 aa17.62■□□□□ 0.41
RXRB-201ENST00000374680 HMX2A2RU54 273 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 I3L4J1 428 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 GPR32O75388 356 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 CCND1P24385 295 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 ALDH18A1P54886 795 aaKnown RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 RPL10AP62906 217 aaKnown RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 DUSP28Q4G0W2 176 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 NCBP2-AS2Q69YL0 99 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 SH2D5Q6ZV89 423 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 HTR3CQ8WXA8 447 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 AZIN2Q96A70 460 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 PGBD4Q96DM1 585 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 KCNK16Q96T55 309 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 ZNF358Q9NW07 568 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 DOCK3Q8IZD9 2030 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 NUP205Q92621 2012 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 BCLAF3A2AJT9 711 aaKnown RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 FAM72CH0Y354 149 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 GYG2O15488 501 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 HUS1O60921 280 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 C1QAP02745 245 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 ERVK-10P10266 1014 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 PSMB4P28070 264 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 SLC18A1P54219 525 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 POU5F1BQ06416 359 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 PRKD1Q15139 912 aaPredicted RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 FAM72AQ5TYM5 149 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 FAM72DQ6L9T8 149 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 RINLQ6ZS11 566 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 PID1Q7Z2X4 250 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 FAM72BQ86X60 149 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 IFNLR1Q8IU57 520 aaPredicted RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 CDKL3Q8IVW4 592 aaPredicted RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 AGR3Q8TD06 166 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 E2F7Q96AV8 911 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 EBNA1BP2Q99848 306 aaKnown RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 RHOBTB2Q9BYZ6 727 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 AMHP03971 560 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 CTSHP09668 335 aa17.61■□□□□ 0.41
RXRB-201ENST00000374680 ESRRAP11474 423 aaPredicted RBP17.61■□□□□ 0.41
RXRB-201ENST00000374680 SAT1P21673 171 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms