RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CYP4Z1Q86W10 505 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF677Q86XU0 584 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GJD3Q8N144 294 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SVOPQ8N4V2 548 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 E2F7Q96AV8 911 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 EEF2KMTQ96G04 330 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 QKIQ96PU8 341 aaKnown RBP eCLIP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SLC40A1Q9NP59 571 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GEMIN8Q9NWZ8 242 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 RBAKQ9NYW8 714 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GULP1Q9UBP9 304 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 FAM198AQ9UFP1 575 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GPN3Q9UHW5 284 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CYTH3O43739 400 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 POLBP06746 335 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 POLR2EP19388 210 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 TPI1P60174 286 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 TBL3Q12788 808 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 UGT3A1Q6NUS8 523 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ZFPM1Q8IX07 1006 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GMCL1P1Q8NEA9 526 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PTPRN2Q92932 1015 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 OTULINQ96BN8 352 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 C17orf80Q9BSJ5 609 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 BTBD7Q9P203 1132 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 EIF3LQ9Y262 564 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ABCC6O95255 1503 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 A0A1W2PQJ5 194 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CNOT3O75175 753 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SOAT2O75908 522 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 KRT6BP04259 564 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PDHBP11177 359 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 JUPP14923 745 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 LSP1P33241 339 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 KRT6CP48668 564 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CNTN1Q12860 1018 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF177Q13360 481 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 C1DQ13901 141 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 USP10Q14694 798 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PDK1Q15118 436 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 NECTIN1Q15223 517 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GPR158Q5T848 1215 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CACHD1Q5VU97 1274 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PLA2G4FQ68DD2 849 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF746Q6NUN9 644 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 KDM7AQ6ZMT4 941 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 LINC00523Q86TU6 105 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PIGKQ92643 395 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ACDQ96AP0 544 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ZFRQ96KR1 1074 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 MED15Q96RN5 788 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ISCUQ9H1K1 167 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 MANSC1Q9H8J5 431 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 NOD2Q9HC29 1040 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 MLXIPLQ9NP71 852 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 NPHS2Q9NP85 383 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 KLHL3Q9UH77 587 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ESYT3A0FGR9 886 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CYB561D2O14569 222 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PSMC3P17980 439 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CDC25CP30307 473 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 RAD23AP54725 363 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SLC30A10Q6XR72 485 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CHMP1BQ7LBR1 199 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 NUP93Q8N1F7 819 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ATP8B4Q8TF62 1192 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 POF1BQ8WVV4 589 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 NKD2Q969F2 451 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 APOL4Q9BPW4 351 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 THTPAQ9BU02 230 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ST3GAL5Q9UNP4 418 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SLC30A1Q9Y6M5 507 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 LOC102724159A0A0B4J2E5 919 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 TTC26A0AVF1 554 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ASNA1O43681 348 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 S100A9P06702 114 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SYPP08247 313 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 AXLP30530 894 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 VSNL1P62760 191 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PLOD1Q02809 727 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 PWP2Q15269 919 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CELF3Q5SZQ8 465 aaKnown RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 TRIM65Q6PJ69 517 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SLC24A5Q71RS6 500 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ADCK2Q7Z695 626 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 ABRAQ8N0Z2 381 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CYP4Z2PQ8N1L4 340 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 SYN2Q92777 582 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 RMND5BQ96G75 393 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 COQ7Q99807 217 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 STK33Q9BYT3 514 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 KLHL25Q9H0H3 589 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 CARD9Q9H257 536 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 TUFT1Q9NNX1 390 aa6.47□□□□□ -1.37
PTPN3-202ENST00000374541 NFKBIL1Q9UBC1 381 aaPredicted RBP6.47□□□□□ -1.37
PTPN3-202ENST00000374541 GLI3P10071 1580 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms