RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.27■□□□□ 0.51
C9orf43-202ENST00000374165 LMCD1Q9NZU5 365 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 DPP7Q9UHL4 492 aa18.27■□□□□ 0.51
C9orf43-202ENST00000374165 CES2O00748 559 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 OAS1P00973 400 aaKnown RBP18.26■□□□□ 0.51
C9orf43-202ENST00000374165 CTNNA1P35221 906 aaKnown RBP18.26■□□□□ 0.51
C9orf43-202ENST00000374165 PCK1P35558 622 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 EPHA5P54756 1037 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 DEUP1Q05D60 604 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 AADACL2Q6P093 401 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 MSANTD2Q6P1R3 559 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 TMEM184AQ6ZMB5 413 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 MTERF4Q7Z6M4 381 aaKnown RBP18.26■□□□□ 0.51
C9orf43-202ENST00000374165 PGAP3Q96FM1 320 aaPredicted RBP18.26■□□□□ 0.51
C9orf43-202ENST00000374165 ATXN3LQ9H3M9 355 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 CLEC1BQ9P126 229 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 PCDHA3Q9Y5H8 950 aa18.26■□□□□ 0.51
C9orf43-202ENST00000374165 RALAP11233 206 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 ZXDBP98169 803 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 ADAM15Q13444 863 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 HECTD3Q5T447 861 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 ANKS1BQ7Z6G8 1248 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 SMG7Q92540 1137 aaKnown RBP18.25■□□□□ 0.51
C9orf43-202ENST00000374165 TRIM62Q9BVG3 475 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 MARCH2Q9P0N8 246 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 IRAK2O43187 625 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 RARAP10276 462 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 POU3F3P20264 500 aaPredicted RBP18.25■□□□□ 0.51
C9orf43-202ENST00000374165 RDXP35241 583 aaKnown RBP18.25■□□□□ 0.51
C9orf43-202ENST00000374165 LLGL1Q15334 1064 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
C9orf43-202ENST00000374165 RARS2Q5T160 578 aaKnown RBP18.25■□□□□ 0.51
C9orf43-202ENST00000374165 RHOT1Q8IXI2 618 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 SHKBP1Q8TBC3 707 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 PBKQ96KB5 322 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 TRPC7Q9HCX4 862 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 ARGLU1Q9NWB6 273 aaPredicted RBP18.25■□□□□ 0.51
C9orf43-202ENST00000374165 GPATCH2LQ9NWQ4 482 aa18.25■□□□□ 0.51
C9orf43-202ENST00000374165 XYLBO75191 536 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 TBX10O75333 385 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 PAPLNO95428 1278 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 ATP5C1P36542 298 aaKnown RBP18.24■□□□□ 0.51
C9orf43-202ENST00000374165 LTBRP36941 435 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 CXCR3P49682 368 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 ZNF211Q13398 564 aaPredicted RBP18.24■□□□□ 0.51
C9orf43-202ENST00000374165 CA9Q16790 459 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 ZC3H12AQ5D1E8 599 aaKnown RBP18.24■□□□□ 0.51
C9orf43-202ENST00000374165 PRSS36Q5K4E3 855 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 MICALL1Q8N3F8 863 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 ARL14EPQ8N8R7 260 aaPredicted RBP18.24■□□□□ 0.51
C9orf43-202ENST00000374165 SFXN1Q9H9B4 322 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 GKN1Q9NS71 199 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 RBM12Q9NTZ6 932 aaKnown RBP18.24■□□□□ 0.51
C9orf43-202ENST00000374165 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 XPO7Q9UIA9 1087 aaKnown RBP18.24■□□□□ 0.51
C9orf43-202ENST00000374165 LCMT1Q9UIC8 334 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 RASAL2Q9UJF2 1139 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 RAB21Q9UL25 225 aa18.24■□□□□ 0.51
C9orf43-202ENST00000374165 PRPSAP2O60256 369 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 HMBSP08397 361 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 PPP3CCP48454 512 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 CTC1Q2NKJ3 1217 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 ANKRD54Q6NXT1 300 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 PDZD4Q76G19 769 aaPredicted RBP18.23■□□□□ 0.51
C9orf43-202ENST00000374165 MMGT1Q8N4V1 131 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 ZNF276Q8N554 614 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 RAPGEF5Q92565 580 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 SLC46A2Q9BY10 475 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 PIDD1Q9HB75 910 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 ZNF446Q9NWS9 450 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 PI4K2BG5E9Z4 385 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 CEP104O60308 925 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 CD48P09326 243 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 PYGMP11217 842 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 CTNNA2P26232 953 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 KCNQ1P51787 676 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 CBX2Q14781 532 aaPredicted RBP18.23■□□□□ 0.51
C9orf43-202ENST00000374165 TEAD2Q15562 447 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 EP400NLQ6ZTU2 488 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 PYROXD2Q8N2H3 581 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 ITFG1Q8TB96 612 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 HSPH1Q92598 858 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 SLC39A13Q96H72 371 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 SNRNP25Q9BV90 132 aaKnown RBP18.23■□□□□ 0.51
C9orf43-202ENST00000374165 WDCPQ9H6R7 721 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 DNMT3LQ9UJW3 386 aa18.23■□□□□ 0.51
C9orf43-202ENST00000374165 SLC12A8A0AV02 714 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 MIF4GDA9UHW6 222 aaKnown RBP18.22■□□□□ 0.51
C9orf43-202ENST00000374165 HDCP19113 662 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 TUBP50607 506 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 ACTRT1Q8TDG2 376 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 ING5Q8WYH8 240 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
C9orf43-202ENST00000374165 WBP2Q969T9 261 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 ZFRQ96KR1 1074 aaKnown RBP18.22■□□□□ 0.51
C9orf43-202ENST00000374165 FCRL2Q96LA5 508 aaPredicted RBP18.22■□□□□ 0.51
C9orf43-202ENST00000374165 ZSWIM3Q96MP5 696 aa18.22■□□□□ 0.51
C9orf43-202ENST00000374165 NACA2Q9H009 215 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms