RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 HAUS3Q68CZ6 603 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 C1orf127Q8N9H9 656 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 KBTBD7Q8WVZ9 684 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 ZNF274Q96GC6 653 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 LHX5Q9H2C1 402 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 MARK1Q9P0L2 795 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 MAGEC2Q9UBF1 373 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-204ENST00000373560 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
HDAC8-204ENST00000373560 A0A1W2PR77 199 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 DFNA5O60443 496 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 SDC3O75056 442 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 PIGRP01833 764 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 ITGB3P05106 788 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 ZNF174Q15697 407 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
HDAC8-204ENST00000373560 VSTM1Q6UX27 236 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 CRELD2Q6UXH1 353 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-204ENST00000373560 PTRH1Q86Y79 214 aaKnown RBP12.97□□□□□ -0.33
HDAC8-204ENST00000373560 CD302Q8IX05 232 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 PARP9Q8IXQ6 854 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
HDAC8-204ENST00000373560 ZSWIM2Q8NEG5 633 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 SNX29Q8TEQ0 813 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-204ENST00000373560 PCED1BQ96HM7 432 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 C17orf75Q9HAS0 396 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 CLEC4EQ9ULY5 219 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
HDAC8-204ENST00000373560 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 HUS1O60921 280 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 EPHX1P07099 455 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 CD46P15529 392 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 XBP1P17861 261 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 PLCG1P19174 1290 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 ANXA13P27216 316 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 GCGRP47871 477 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 MFAP3P55082 362 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 RACK1P63244 317 aaKnown RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 KYAT1Q16773 422 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 TMEM215Q68D42 235 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 FAM26EQ8N5C1 309 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 DUSP9Q99956 384 aaKnown RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 ASB7Q9H672 318 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 PLEKHB1Q9UF11 243 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-204ENST00000373560 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
HDAC8-204ENST00000373560 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
HDAC8-204ENST00000373560 A0A1B0GVM2 712 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 CLDN5O00501 218 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
HDAC8-204ENST00000373560 OPA1O60313 960 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 TBX18O95935 607 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 PPP3CCP48454 512 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 BCAT1P54687 386 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 CDH8P55286 799 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 MDH1BQ5I0G3 518 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
HDAC8-204ENST00000373560 KIAA0895LQ68EN5 471 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 BLOC1S3Q6QNY0 202 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 SPATS2Q86XZ4 545 aaKnown RBP12.95□□□□□ -0.34
HDAC8-204ENST00000373560 LSMEM2Q8N112 164 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 TMEM86AQ8N2M4 240 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 SCAMP5Q8TAC9 235 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 FBXO32Q969P5 355 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-204ENST00000373560 MMTAG2Q9BU76 263 aaKnown RBP12.95□□□□□ -0.34
HDAC8-204ENST00000373560 ZNF518BQ9C0D4 1074 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
HDAC8-204ENST00000373560 A0A1W2PPC4 97 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 FAM47DPA6NHR8 397 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 ITGB2P05107 769 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 PCSK1P29120 753 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 NXPH1P58417 271 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 RPS14P62263 151 aaKnown RBP12.94□□□□□ -0.34
HDAC8-204ENST00000373560 GRIN1Q05586 938 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 KCNJ12Q14500 433 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 CLCA4Q14CN2 919 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 HECTD3Q5T447 861 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
HDAC8-204ENST00000373560 C8orf48Q96LL4 319 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms