RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 UGT1A8Q9HAW9 530 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 LRRC4Q9HBW1 653 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 ARHGEF4Q9NR80 690 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 TIMM13Q9Y5L4 95 aaPredicted RBP19.38■□□□□ 0.69
USP49-202ENST00000373010 CDY2AQ9Y6F7 541 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 DGKIO75912 1065 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 C6orf222P0C671 652 aaPredicted RBP19.37■□□□□ 0.69
USP49-202ENST00000373010 MLH1P40692 756 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 RGS2P41220 211 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 KIF2BQ8N4N8 673 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 TFB1MQ8WVM0 346 aaKnown RBP19.37■□□□□ 0.69
USP49-202ENST00000373010 LPPQ93052 612 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 SIGLEC10Q96LC7 697 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 MYLK2Q9H1R3 596 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 TSPYL2Q9H2G4 693 aaPredicted RBP19.37■□□□□ 0.69
USP49-202ENST00000373010 CD248Q9HCU0 757 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 CRTAC1Q9NQ79 661 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 TRPM7Q96QT4 1865 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 TRIM49D1C9J1S8 452 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 M0QYT0 321 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 MAGEA3P43357 314 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 NEK3P51956 506 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 MRPS6P82932 125 aaKnown RBP19.37■□□□□ 0.69
USP49-202ENST00000373010 SLC18A2Q05940 514 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 NME3Q13232 169 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 C4orf22Q6V702 233 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 LRRC6Q86X45 466 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 GSTCDQ8NEC7 633 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 HTR3CQ8WXA8 447 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 PTPRN2Q92932 1015 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 APOPT1Q96IL0 206 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 SENP8Q96LD8 212 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 OLFM3Q96PB7 478 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 GAD1Q99259 594 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 NPY6RQ99463 290 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 KRT82Q9NSB4 513 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 DDX43Q9NXZ2 648 aaKnown RBP19.37■□□□□ 0.69
USP49-202ENST00000373010 Q9Y3F1 56 aa19.37■□□□□ 0.69
USP49-202ENST00000373010 CFAP73A6NFT4 308 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 GABRDO14764 452 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 CREB3O43889 395 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 MGRN1O60291 552 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 CTSHP09668 335 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 ALADP13716 330 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 TPSB2P20231 275 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 ZNF157P51786 506 aaPredicted RBP19.36■□□□□ 0.69
USP49-202ENST00000373010 TKTL1P51854 596 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 TPSAB1Q15661 275 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 TRMT10BQ6PF06 316 aaKnown RBP19.36■□□□□ 0.69
USP49-202ENST00000373010 C17orf99Q6UX52 265 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 RASAL3Q86YV0 1011 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 SIX6OS1Q8N1H7 587 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 RNF139Q8WU17 664 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 C10orf82Q8WW14 230 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 WNT8BQ93098 351 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 FAM111AQ96PZ2 611 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 APBA2Q99767 749 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 CEP41Q9BYV8 373 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 MIOSQ9NXC5 875 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 ST3GAL5Q9UNP4 418 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 CHKBQ9Y259 395 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 USH1CQ9Y6N9 552 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 NRP1O14786 923 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 APOEP02649 317 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 NQO1P15559 274 aaKnown RBP19.36■□□□□ 0.69
USP49-202ENST00000373010 PRKCHP24723 683 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 NOS2P35228 1153 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 SNCBQ16143 134 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 ANKRD20A2Q5SQ80 823 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 ANKRD20A1Q5TYW2 823 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 TTC39BQ5VTQ0 682 aaPredicted RBP19.36■□□□□ 0.69
USP49-202ENST00000373010 ANKRD20A3Q5VUR7 823 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 RNF169Q8NCN4 708 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 TRPV1Q8NER1 839 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 NPHS2Q9NP85 383 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 PIGVQ9NUD9 493 aa19.36■□□□□ 0.69
USP49-202ENST00000373010 CSH1P0DML2 217 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 CSH2P0DML3 217 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 OVGP1Q12889 678 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 SEMA5AQ13591 1074 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 BMPR2Q13873 1038 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 ICE2Q659A1 982 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 CTU1Q7Z7A3 348 aaKnown RBP19.35■□□□□ 0.69
USP49-202ENST00000373010 ADAM32Q8TC27 787 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 KCTD13Q8WZ19 329 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 NT5C3BQ969T7 300 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 KLHL29Q96CT2 875 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 ERP27Q96DN0 273 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 EBNA1BP2Q99848 306 aaKnown RBP19.35■□□□□ 0.69
USP49-202ENST00000373010 VPS11Q9H270 941 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 FAM105AQ9NUU6 356 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 TRDMT1O14717 391 aaKnown RBP19.35■□□□□ 0.69
USP49-202ENST00000373010 FAM200BP0CF97 657 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 ETV4P43268 484 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 CLCNKBP51801 687 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 CCDC15Q0P6D6 951 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 TAF2Q6P1X5 1199 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 TP53INP2Q8IXH6 220 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 C3orf58Q8NDZ4 430 aa19.35■□□□□ 0.69
USP49-202ENST00000373010 TTC17Q96AE7 1141 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms