RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 ARHGAP24Q8N264 748 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 MAGEB5Q9BZ81 275 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 XAB2Q9HCS7 855 aaKnown RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 ZNF212Q9UDV6 495 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 TOP3BO95985 862 aaKnown RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 ENO1P06733 434 aaKnown RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 PDHA1P08559 390 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 NR2C2P49116 596 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 CCNHP51946 323 aaPredicted RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 IGBP1P78318 339 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 THOC5Q13769 683 aaKnown RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 DBN1Q16643 649 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 Q3C1V9 767 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 DLK2Q6UY11 383 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 ZDHHC17Q8IUH5 632 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 PPP1R16BQ96T49 567 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 SYT15Q9BQS2 421 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
CTPS1-202ENST00000372621 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
CTPS1-202ENST00000372621 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 TSPAN1O60635 241 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 SERPINA6P08185 405 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 TUBB3Q13509 450 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 IRGCQ6NXR0 463 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 C1orf21Q9H246 121 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 THAP1Q9NVV9 213 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 TM7SF2O76062 418 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 CNTFP26441 200 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 TBCCQ15814 346 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 KCNT2Q6UVM3 1135 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 ACOT1Q86TX2 421 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 STMN2Q93045 179 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 KRT82Q9NSB4 513 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 MARCOQ9UEW3 520 aaPredicted RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 EMCNQ9ULC0 261 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 VTNP04004 478 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 KITP10721 976 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 ATXN1P54253 815 aaKnown RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 NIPAL4Q0D2K0 466 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 MBLAC2Q68D91 279 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
CTPS1-202ENST00000372621 DTX3LQ8TDB6 740 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 ZNF778Q96MU6 729 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 OLFM3Q96PB7 478 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 EBF4Q9BQW3 602 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
CTPS1-202ENST00000372621 MYO18AQ92614 2054 aaKnown RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 DGKIO75912 1065 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ADORA2AP29274 412 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ARHGAP1Q07960 439 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 STX3Q13277 289 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 NCBP2-AS2Q69YL0 99 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ZCCHC23Q6ZST2 131 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 UNC5BQ8IZJ1 945 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 PANX3Q96QZ0 392 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 KCTD15Q96SI1 283 aaPredicted RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 DTLQ9NZJ0 730 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 WASF2Q9Y6W5 498 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 PPEF2O14830 753 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 UPP2O95045 317 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ALDOAP04075 364 aaKnown RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 LGALS2P05162 132 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 VAV1P15498 845 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 AOC1P19801 751 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 RPL34P49207 117 aaKnown RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 SLC26A9Q7LBE3 791 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 CLEC4CQ8WTT0 213 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 DHX35Q9H5Z1 703 aaKnown RBP13.16□□□□□ -0.3
CTPS1-202ENST00000372621 SORCS3Q9UPU3 1222 aa13.16□□□□□ -0.3
CTPS1-202ENST00000372621 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms