RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
SNCG-202ENST00000372017 TMEM59LQ9UK28 342 aa13.12□□□□□ -0.31
SNCG-202ENST00000372017 LSM7Q9UK45 103 aaKnown RBP13.12□□□□□ -0.31
SNCG-202ENST00000372017 STRIP2Q9ULQ0 834 aa13.12□□□□□ -0.31
SNCG-202ENST00000372017 CFAP54Q96N23 3096 aa13.12□□□□□ -0.31
SNCG-202ENST00000372017 ATG2BQ96BY7 2078 aa13.12□□□□□ -0.31
SNCG-202ENST00000372017 TCRBV5S1A1TA0A578 114 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 GOLGA8SH3BPF8 625 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 GFRA2O00451 464 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.312e-15■■■■□ 25.9
SNCG-202ENST00000372017 TRDMT1O14717 391 aaKnown RBP13.11□□□□□ -0.31
SNCG-202ENST00000372017 CAPN9O14815 690 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 IRAK2O43187 625 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 GFRA3O60609 400 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 HSF2BPO75031 334 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 DAB1O75553 588 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 TRUB2O95900 331 aaKnown RBP13.11□□□□□ -0.31
SNCG-202ENST00000372017 EGFP01133 1207 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 HOXC13P31276 330 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 FLT3P36888 993 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 SGSHP51688 502 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 TBX4P57082 545 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
SNCG-202ENST00000372017 ZBED6P86452 979 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 TCF15Q12870 199 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 CCINQ13939 588 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 TMEM196Q5HYL7 178 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 FAM102AQ5T9C2 384 aaPredicted RBP13.11□□□□□ -0.31
SNCG-202ENST00000372017 NADSYN1Q6IA69 706 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 TRIM72Q6ZMU5 477 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 TPGS1Q6ZTW0 290 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 PHF13Q86YI8 300 aaPredicted RBP13.11□□□□□ -0.31
SNCG-202ENST00000372017 ZDHHC17Q8IUH5 632 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 NAT16Q8N8M0 369 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 JOSD2Q8TAC2 188 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 GOLGA1Q92805 767 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 PLD4Q96BZ4 506 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 OTUB2Q96DC9 234 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 MSANTD3Q96H12 275 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 C2orf42Q9NWW7 574 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 PLK2Q9NYY3 685 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
SNCG-202ENST00000372017 I6L893 689 aaPredicted RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 ADH5P11766 374 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 TNFAIP3P21580 790 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 SLC6A4P31645 630 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 NOS2P35228 1153 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 ZC3H12AQ5D1E8 599 aaKnown RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 SPECC1LQ69YQ0 1117 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 WDR59Q6PJI9 974 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 Q6ZS52 159 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 BNIPLQ7Z465 357 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 EMC1Q8N766 993 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 CD101Q93033 1021 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 BHMTQ93088 406 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 NT5C3BQ969T7 300 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 NELL2Q99435 816 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 NPY6RQ99463 290 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 P2RY13Q9BPV8 354 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 DCLK3Q9C098 648 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 METTL5Q9NRN9 209 aaKnown RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
SNCG-202ENST00000372017 ADAM22Q9P0K1 906 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 MARK1Q9P0L2 795 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 TLR6Q9Y2C9 796 aa13.1□□□□□ -0.31
SNCG-202ENST00000372017 SYNJ2BP-COX16A0A087WUM0 186 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 TMCO5BA8MYB1 307 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 K7EQS6 105 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 TSPAN3O60637 253 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 ADH1CP00326 375 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 CCDC172P0C7W6 258 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 SCNN1AP37088 669 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 MATKP42679 507 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
SNCG-202ENST00000372017 GAD2Q05329 585 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 RING1Q06587 406 aa13.09□□□□□ -0.31
SNCG-202ENST00000372017 KLHL30Q0D2K2 578 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms