RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 RAD54BQ9Y620 910 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 TCRBV21S2A2A0A5A6 115 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 BCLAF3A2AJT9 711 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 BECN2A8MW95 431 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 PRR5-ARHGAP8B1AHC4 643 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 PATE3B3GLJ2 98 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 M0QYV0 167 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 TM4SF5O14894 197 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 CAVIN2O95810 425 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 GABRG2P18507 467 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 MPLP40238 635 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 GPD2P43304 727 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 RPL34P49207 117 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 COG7P83436 770 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 ARHGAP8P85298 464 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 GCNT1Q02742 428 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 FMNL3Q8IVF7 1028 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 TRIM44Q96DX7 344 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 PIWIL1Q96J94 861 aaKnown RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 UBE2TQ9NPD8 197 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 CACNA2D2Q9NY47 1150 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 WDR35Q9P2L0 1181 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 HESX1Q9UBX0 185 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 KIAA1257Q9ULG3 409 aa11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.49□□□□□ -0.57
EXOSC1-202ENST00000370885 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 GOLGA6L7A0A1B0GV03 622 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 SLC30A4O14863 429 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 TSPAN3O60637 253 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 SETSIPP0DME0 302 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 NTSR1P30989 418 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 GBP1P32455 592 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 PTGER3P43115 390 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 DGKGP49619 791 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 MFAP3P55082 362 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 CREB5Q02930 508 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 GOLGA8FQ08AF8 430 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 GOLGA8DPQ0D2H9 430 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 HSF5Q4G112 596 aaPredicted RBP11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 ANO6Q4KMQ2 910 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 USP39Q53GS9 565 aaKnown RBP11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 EOGTQ5NDL2 527 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 RSRC2Q7L4I2 434 aaKnown RBP11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 TMEFF1Q8IYR6 380 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 SCML4Q8N228 414 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 ARHGAP18Q8N392 663 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 WDTC1Q8N5D0 677 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 TRIML1Q8N9V2 468 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 CCDC26Q8TAB7 109 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 SORCS1Q8WY21 1168 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 XPO6Q96QU8 1125 aaKnown RBP11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 GABRG3Q99928 467 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 TMEM74BQ9NUR3 256 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
EXOSC1-202ENST00000370885 ESPNB1AK53 854 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 AP5Z1O43299 807 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 GNA14O95837 355 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 IGLV3-27P01718 113 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 HOXB2P14652 356 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 NDUFV2P19404 249 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 HOXD9P28356 352 aaPredicted RBP11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 FOXK2Q01167 660 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 SYPL2Q5VXT5 272 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 NADSYN1Q6IA69 706 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 MSANTD2Q6P1R3 559 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 TADA2BQ86TJ2 420 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 SIX6OS1Q8N1H7 587 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 CPXM2Q8N436 756 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 DEFB119Q8N690 84 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 WFDC5Q8TCV5 224 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 NETO1Q8TDF5 533 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 IPO4Q8TEX9 1081 aaKnown RBP11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 ZNF606Q8WXB4 792 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 PLD4Q96BZ4 506 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 CDK5RAP1Q96SZ6 601 aaKnown RBP11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 RTKNQ9BST9 563 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 DNAI2Q9GZS0 605 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 MIS12Q9H081 205 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 CBX8Q9HC52 389 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 POLMQ9NP87 494 aaPredicted RBP11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 STOML2Q9UJZ1 356 aa11.47□□□□□ -0.57
EXOSC1-202ENST00000370885 NAALADL1Q9UQQ1 740 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms