RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 AKAP1Q92667 903 aaKnown RBP eCLIP10.71□□□□□ -0.7
PRDM1-201ENST00000369089 TP63Q9H3D4 680 aaPredicted RBP10.71□□□□□ -0.7
PRDM1-201ENST00000369089 TOR3AQ9H497 397 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 KRT84Q9NSB2 600 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 ZMYM2Q9UBW7 1377 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SSX5O60225 188 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 VARSP26640 1264 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 RRM2P31350 389 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 RPA3P35244 121 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ADCY7P51828 1080 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 STX5Q13190 355 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 TRIM28Q13263 835 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 PDK1Q15118 436 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KIF19Q2TAC6 998 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SPOPLQ6IQ16 392 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 LCORLQ8N3X6 602 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 FAM149B1Q96BN6 582 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 CLPTM1LQ96KA5 538 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 PRICKLE1Q96MT3 831 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SMYD2Q9NRG4 433 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NINJ2Q9NZG7 142 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 IP6K2Q9UHH9 426 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SERPINB13Q9UIV8 391 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NOX1Q9Y5S8 564 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ALG6Q9Y672 507 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 LIFRP42702 1097 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ATP5OP48047 213 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 GABPAQ06546 454 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 TRIM32Q13049 653 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NEPROQ6NW34 567 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 CRTC3Q6UUV7 619 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 C3orf62Q6ZUJ4 267 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ZNF410Q86VK4 478 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 BHLHE22Q8NFJ8 381 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 AFG1LQ8WV93 481 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NARS2Q96I59 477 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 YME1L1Q96TA2 773 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KIF17Q9P2E2 1029 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KLHL3Q9UH77 587 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KCNE2Q9Y6J6 123 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 IQSEC2Q5JU85 1478 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 PREX1Q8TCU6 1659 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KRBA1A5PL33 1030 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 OR2B6P58173 313 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 TGFBIQ15582 683 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 CERKLQ49MI3 558 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 IQSEC1Q6DN90 963 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SLC22A16Q86VW1 577 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 FAM178BQ8IXR5 827 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 CLIP4Q8N3C7 705 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 C19orf18Q8NEA5 215 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NCSTNQ92542 709 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 CDRT15Q96T59 188 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ATP13A3Q9H7F0 1226 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 PKD2L1Q9P0L9 805 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 FAM8A1Q9UBU6 413 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NAGPAQ9UK23 515 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 USP42Q9H9J4 1324 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KLRF2D3W0D1 207 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 NEMP1O14524 444 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 KIAA0391O15091 583 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 GH1P01241 217 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 FTLP02792 175 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 CDH2P19022 906 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SOX5P35711 763 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 ETV1P50549 477 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SCNN1DP51172 638 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 GNA13Q14344 377 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 PKN2Q16513 984 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 PCYOX1LQ8NBM8 494 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 EXOSC4Q9NPD3 245 aaKnown RBP10.7□□□□□ -0.7
PRDM1-201ENST00000369089 SACM1LQ9NTJ5 587 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
PRDM1-201ENST00000369089 UTYO14607 1347 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 A0A0A6YYK5 440 aaPredicted RBP10.69□□□□□ -0.7
PRDM1-201ENST00000369089 AQP9O43315 295 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 DYRK3O43781 588 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 SNAP91O60641 907 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 MAGP20916 626 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 HOXD13P35453 343 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 PPP2R5DQ14738 602 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 QPRTQ15274 297 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 CYP2A13Q16696 494 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 BORAQ6PGQ7 559 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 CORO6Q6QEF8 472 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 PAGE2Q7Z2X7 111 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 PPM1KQ8N3J5 372 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 SVOPQ8N4V2 548 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 ANKRD53Q8N9V6 530 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 MRPL47Q9HD33 250 aaKnown RBP10.69□□□□□ -0.7
PRDM1-201ENST00000369089 TMEM9Q9P0T7 183 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 ZSWIM5Q9P217 1185 aa10.69□□□□□ -0.7
PRDM1-201ENST00000369089 ANAPC7Q9UJX3 599 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms