RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 FUKQ8N0W3 1084 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 CLEC4CQ8WTT0 213 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 FERMT1Q9BQL6 677 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 HTATIP2Q9BUP3 242 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 KIF9Q9HAQ2 790 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 ETNK1Q9HBU6 452 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 ZNF180Q9UJW8 692 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 FZD10Q9ULW2 581 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 CYB561D2O14569 222 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 GABRDO14764 452 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 EDF1O60869 148 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 ATP2C2O75185 946 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 DAB1O75553 588 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 NPR3P17342 541 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 TFE3P19532 575 aaPredicted RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 ALDH3A1P30838 453 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 MRPS5P82675 430 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 CDK16Q00536 496 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 BNIP1Q12981 228 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 SLC1A5Q15758 541 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 ZKSCAN8Q15776 578 aaPredicted RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 ZNF618Q5T7W0 954 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 LVRNQ6Q4G3 990 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 RSPH3Q86UC2 560 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 PIGZQ86VD9 579 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 SLC26A11Q86WA9 606 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 TMEM86AQ8N2M4 240 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 QKIQ96PU8 341 aaKnown RBP eCLIP13.62□□□□□ -0.23
ECM1-202ENST00000369047 KCTD15Q96SI1 283 aaPredicted RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 XAB2Q9HCS7 855 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 ABCF3Q9NUQ8 709 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
ECM1-202ENST00000369047 STAP1Q9ULZ2 295 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 TRIP12Q14669 1992 aaPredicted RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 HCRTO43612 131 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 FBXO21O94952 628 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 ASGR1P07306 291 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 APRTP07741 180 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 LHX1P48742 406 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 NRLP54845 237 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 AIF1P55008 147 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 BEX3Q00994 111 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 SLC18A2Q05940 514 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 PTK7Q13308 1070 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 EFTUD2Q15029 972 aaKnown RBP eCLIP13.62□□□□□ -0.23
ECM1-202ENST00000369047 KBTBD12Q3ZCT8 623 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 HEATR6Q6AI08 1181 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 CGB2Q6NT52 195 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 CYS1Q717R9 158 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 CAND1Q86VP6 1230 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 DEFB106AQ8N104 65 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 ZNF75CPQ92670 426 aaPredicted RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 STARD7Q9NQZ5 370 aa13.62□□□□□ -0.23
ECM1-202ENST00000369047 ZC3H7BQ9UGR2 993 aaKnown RBP13.62□□□□□ -0.23
ECM1-202ENST00000369047 PCNTO95613 3336 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 SF3B1O75533 1304 aaKnown RBP eCLIP13.61□□□□□ -0.23
ECM1-202ENST00000369047 DGKIO75912 1065 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 KRT37O76014 449 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 UBOX5O94941 541 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 ALADP13716 330 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 PRKCHP24723 683 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 FDFT1P37268 417 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 SKIV2L2P42285 1042 aaKnown RBP13.61□□□□□ -0.23
ECM1-202ENST00000369047 MAGEA3P43357 314 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 SULT1E1P49888 294 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 MRPS6P82932 125 aaKnown RBP13.61□□□□□ -0.23
ECM1-202ENST00000369047 SLC10A2Q12908 348 aaPredicted RBP13.61□□□□□ -0.23
ECM1-202ENST00000369047 TTC39BQ5VTQ0 682 aaPredicted RBP13.61□□□□□ -0.23
ECM1-202ENST00000369047 BNIPLQ7Z465 357 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 OSTM1Q86WC4 334 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 LRRC6Q86X45 466 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 CCDC63Q8NA47 563 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 ZNF398Q8TD17 642 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 TFB1MQ8WVM0 346 aaKnown RBP13.61□□□□□ -0.23
ECM1-202ENST00000369047 SLC9A7Q96T83 725 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
ECM1-202ENST00000369047 GOLGA2P5Q9HBQ8 144 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 LRRC4Q9HBW1 653 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 RNF19AQ9NV58 838 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 USP3Q9Y6I4 520 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 USH1CQ9Y6N9 552 aa13.61□□□□□ -0.23
ECM1-202ENST00000369047 A0A1W2PQ45 241 aaPredicted RBP13.6□□□□□ -0.23
ECM1-202ENST00000369047 A0A1W2PQY0 241 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 H3BRJ5 948 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 PTGESO14684 152 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 ATP5HO75947 161 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 STK10O94804 968 aaKnown RBP13.6□□□□□ -0.23
ECM1-202ENST00000369047 COL6A1P12109 1028 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 MLNP12872 115 aa13.6□□□□□ -0.23
ECM1-202ENST00000369047 GBE1Q04446 702 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms