RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SLC9A4Q6AI14 798 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 LILRA6Q6PI73 481 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 PQLC3Q8N755 202 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 TTC13Q8NBP0 860 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 PDZD8Q8NEN9 1154 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 PCDH19Q8TAB3 1148 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 TRMT2BQ96GJ1 504 aaKnown RBP24.79■■□□□ 1.56
SNX3-203ENST00000368979 MAK16Q9BXY0 300 aaKnown RBP24.79■■□□□ 1.56
SNX3-203ENST00000368979 PLEKHA4Q9H4M7 779 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 TLR9Q9NR96 1032 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 OLA1Q9NTK5 396 aaKnown RBP24.79■■□□□ 1.56
SNX3-203ENST00000368979 ARHGEF38Q9NXL2 777 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 APOC4-APOC2K7ER74 178 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 LIASO43766 372 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 ZMYND10O75800 440 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 APOC2P02655 101 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 CA3P07451 260 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 MCM3P25205 808 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 KCNJ1P48048 391 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 SNX1Q13596 522 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 BRMS1LQ5PSV4 323 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 SNX30Q5VWJ9 437 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 FBXO38Q6PIJ6 1188 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 JAMLQ86YT9 394 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 CCDC105Q8IYK2 499 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 MRPL43Q8N983 215 aaKnown RBP24.78■■□□□ 1.56
SNX3-203ENST00000368979 CSPG4P5Q96PW8 444 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 FAM118BQ9BPY3 351 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 EMILIN2Q9BXX0 1053 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 FRMD8P1Q9BZ68 369 aaPredicted RBP24.78■■□□□ 1.56
SNX3-203ENST00000368979 TKTL2Q9H0I9 626 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 GDF3Q9NR23 364 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 CWC15Q9P013 229 aaKnown RBP24.78■■□□□ 1.56
SNX3-203ENST00000368979 PCDHA11Q9Y5I1 949 aa24.78■■□□□ 1.56
SNX3-203ENST00000368979 ZSCAN5CA6NGD5 496 aaPredicted RBP24.77■■□□□ 1.56
SNX3-203ENST00000368979 C2orf71A6NGG8 1288 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 MSI1O43347 362 aaKnown RBP24.77■■□□□ 1.56
SNX3-203ENST00000368979 GUCY2DQ02846 1103 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 SEMA3BQ13214 749 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 VEPH1Q14D04 833 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 PLPP4Q5VZY2 271 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 ZNF276Q8N554 614 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.77■■□□□ 1.56
SNX3-203ENST00000368979 HAUS1Q96CS2 278 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 SAMD11Q96NU1 681 aa24.77■■□□□ 1.56
SNX3-203ENST00000368979 HIDE1A8MVS5 230 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 TNFRSF8P28908 595 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 ARL4AP40617 200 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 OTUD4Q01804 1114 aaKnown RBP24.76■■□□□ 1.55
SNX3-203ENST00000368979 NNTQ13423 1086 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 PPP2R5DQ14738 602 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 BRD3Q15059 726 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 PLD5Q8N7P1 536 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 SLC35B2Q8TB61 432 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 ACTL9Q8TC94 416 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 NKD2Q969F2 451 aaPredicted RBP24.76■■□□□ 1.55
SNX3-203ENST00000368979 HINFPQ9BQA5 517 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 TRIM51Q9BSJ1 452 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 DNPEPQ9ULA0 475 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 TLR6Q9Y2C9 796 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 CCDC151A5D8V7 595 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 H3BRJ5 948 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 APOL1O14791 398 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 ECEL1O95672 775 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 PECAM1P16284 738 aaPredicted RBP24.76■■□□□ 1.55
SNX3-203ENST00000368979 GOT1P17174 413 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 TGM2P21980 687 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 CCR1P32246 355 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 EPHB3P54753 998 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 PLD1Q13393 1074 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 IFT20Q8IY31 132 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 ATL2Q8NHH9 583 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 GRK7Q8WTQ7 553 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 SEC14L1Q92503 715 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 RNF34Q969K3 372 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 PSMG2Q969U7 264 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 SLC39A13Q96H72 371 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 TGS1Q96RS0 853 aaKnown RBP24.76■■□□□ 1.55
SNX3-203ENST00000368979 EPB41L5Q9HCM4 733 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 ARGLU1Q9NWB6 273 aaPredicted RBP24.76■■□□□ 1.55
SNX3-203ENST00000368979 RASAL2Q9UJF2 1139 aa24.76■■□□□ 1.55
SNX3-203ENST00000368979 PDE4DIPQ5VU43 2346 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 GRM6O15303 877 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 SPATA31D3P0C874 917 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 EFEMP1Q12805 493 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 BYSLQ13895 437 aaKnown RBP24.75■■□□□ 1.55
SNX3-203ENST00000368979 CAMK1Q14012 370 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 OASLQ15646 514 aaKnown RBP24.75■■□□□ 1.55
SNX3-203ENST00000368979 SPATA31D4Q6ZUB0 917 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 CDK5RAP1Q96SZ6 601 aaKnown RBP24.75■■□□□ 1.55
SNX3-203ENST00000368979 RAB17Q9H0T7 212 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 PRDM16Q9HAZ2 1276 aa24.75■■□□□ 1.55
SNX3-203ENST00000368979 SAE1Q9UBE0 346 aaPredicted RBP24.75■■□□□ 1.55
SNX3-203ENST00000368979 YBX2Q9Y2T7 364 aaKnown RBP24.75■■□□□ 1.55
SNX3-203ENST00000368979 ZNF840PA6NDX5 716 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 KCNU1A8MYU2 1149 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 FAM72CH0Y354 149 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 TLR5O60602 858 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 KLRC2P26717 231 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 ZNF135P52742 658 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms