RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CISD3P0C7P0 127 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 RALAP11233 206 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 CMA1P23946 247 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 HOXD12P35452 270 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 SYKP43405 635 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 KIF11P52732 1056 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 EFEMP1Q12805 493 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 SEMA3BQ13214 749 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 KLHDC10Q6PID8 442 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 Q6ZNB5 142 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 CCDC186Q7Z3E2 898 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 TADA2BQ86TJ2 420 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 MINDY1Q8N5J2 469 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 TRIML1Q8N9V2 468 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 DUSP16Q9BY84 665 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 DNAI2Q9GZS0 605 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 CD248Q9HCU0 757 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 STON1Q9Y6Q2 735 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 RHOBTB3O94955 611 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 KLKB1P03952 638 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 RPL13P26373 211 aaKnown RBP10.86□□□□□ -0.67
CLRN3-201ENST00000368671 CORO1AP31146 461 aaKnown RBP10.86□□□□□ -0.67
CLRN3-201ENST00000368671 PSMC2P35998 433 aaKnown RBP10.86□□□□□ -0.67
CLRN3-201ENST00000368671 NDUFA8P51970 172 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 KRT85P78386 507 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 SIM1P81133 766 aaPredicted RBP10.86□□□□□ -0.67
CLRN3-201ENST00000368671 DPYDQ12882 1025 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 NFIL3Q16649 462 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 GEN1Q17RS7 908 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 PLEKHG6Q3KR16 790 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 RABEPKQ7Z6M1 372 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 P2RY11Q96G91 374 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 MRGPRX1Q96LB2 322 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 HEXIM2Q96MH2 286 aaKnown RBP10.86□□□□□ -0.67
CLRN3-201ENST00000368671 CAPN10Q9HC96 672 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 TMEM8AQ9HCN3 771 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 CLIC5Q9NZA1 410 aa10.86□□□□□ -0.67
CLRN3-201ENST00000368671 KMT2BQ9UMN6 2715 aaPredicted RBP10.85□□□□□ -0.67
CLRN3-201ENST00000368671 A0A1W2PQD8 194 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 SLC12A8A0AV02 714 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 MEI4A8MW99 385 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 GFRA2O00451 464 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 SYPP08247 313 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 MAOBP27338 520 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 CHKAP35790 457 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 IL12RB1P42701 662 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 MFAP3P55082 362 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 COG7P83436 770 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 ADAM9Q13443 819 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 STARD3Q14849 445 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 FUT11Q495W5 492 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 FYB2Q5VWT5 728 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 KRT39Q6A163 491 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 RSRC2Q7L4I2 434 aaKnown RBP10.85□□□□□ -0.67
CLRN3-201ENST00000368671 PIP4P1Q86T03 277 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 DENND1CQ8IV53 801 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 GUF1Q8N442 669 aaKnown RBP10.85□□□□□ -0.67
CLRN3-201ENST00000368671 SEMA4DQ92854 862 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 GATA6Q92908 595 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 TMEM176AQ96HP8 235 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 CDK5RAP1Q96SZ6 601 aaKnown RBP10.85□□□□□ -0.67
CLRN3-201ENST00000368671 PRDM16Q9HAZ2 1276 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 FBXO10Q9UK96 956 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 KLK13Q9UKR3 277 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 AGO1Q9UL18 857 aaKnown RBP10.85□□□□□ -0.67
CLRN3-201ENST00000368671 ZNF510Q9Y2H8 683 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 USP3Q9Y6I4 520 aa10.85□□□□□ -0.67
CLRN3-201ENST00000368671 MYO18AQ92614 2054 aaKnown RBP10.85□□□□□ -0.67
CLRN3-201ENST00000368671 UPK3BL1B0FP48 263 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 UPK3BL2E5RIL1 263 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 PENKP01210 267 aaPredicted RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 CYBBP04839 570 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 GNSP15586 552 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 CD6P30203 668 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 MXI1P50539 228 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 YWHAGP61981 247 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 FAM193AP78312 1265 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 KRBA2Q6ZNG9 492 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 PIGZQ86VD9 579 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 CACUL1Q86Y37 369 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 SMYD4Q8IYR2 804 aaPredicted RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 ARHGAP18Q8N392 663 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 ZNF276Q8N554 614 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 KDF1Q8NAX2 398 aaPredicted RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 ZCCHC14Q8WYQ9 949 aaKnown RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 EEF2KMTQ96G04 330 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 ZNF419Q96HQ0 510 aaPredicted RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 CAMK1GQ96NX5 476 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 ARID3AQ99856 593 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 GPR174Q9BXC1 333 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 DCLK3Q9C098 648 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 CIPCQ9C0C6 399 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 MIR1-1HGQ9H1L0 117 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 GOLPH3LQ9H4A5 285 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 CISHQ9NSE2 258 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms