RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 KCNK4Q9NYG8 393 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 CNTN3Q9P232 1028 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 CREB3O43889 395 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 PFKMP08237 780 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 RARBP10826 455 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 ADORA2AP29274 412 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 HDAC4P56524 1084 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 TTLL4Q14679 1199 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 SH2D5Q6ZV89 423 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 KCNN1Q92952 543 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 CCDC124Q96CT7 223 aaKnown RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 ZNF333Q96JL9 665 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 ASB7Q9H672 318 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 LGR5O75473 907 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 USP1O94782 785 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 C22orf31O95567 290 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 LINGO3P0C6S8 592 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 UBTFL6P0CB48 400 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 KIZQ2M2Z5 673 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 OLFML1Q6UWY5 402 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 XAB2Q9HCS7 855 aaKnown RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 SNTG2Q9NY99 539 aa12.74□□□□□ -0.37
PTPN7-202ENST00000367279 POLR2AP24928 1970 aaKnown RBP12.74□□□□□ -0.37
PTPN7-202ENST00000367279 TRDMT1O14717 391 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 DNAJC6O75061 913 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ENDOD1O94919 500 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 GOT1P17174 413 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 NCF2P19878 526 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 MGAT1P26572 445 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SARNPP82979 210 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 CCDC185Q8N715 623 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 C18orf25Q96B23 403 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SIP14410 1827 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 LOC100653049A0A140TA62 436 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 BCLAF3A2AJT9 711 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SOCS7O14512 581 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ITM2AO43736 263 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 KRT34O76011 436 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 BPGMP07738 259 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ABCG1P45844 678 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 BAG6P46379 1132 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 MRPS35P82673 323 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SLC25A3Q00325 362 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 KRT72Q14CN4 511 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SPDYAQ5MJ70 313 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 RIPOR1Q6ZS17 1223 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 WDR75Q8IWA0 830 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SIGLEC10Q96LC7 697 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 PLAC1Q9HBJ0 212 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 TAGLN3Q9UI15 199 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ITGA11Q9UKX5 1188 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 HBS1LQ9Y450 684 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 TPP1O14773 563 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 LGALS2P05162 132 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ACADSP16219 412 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ARL4AP40617 200 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 GTF2A2P52657 109 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 PGBD4Q96DM1 585 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 MTBPQ96DY7 904 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 ANKRD27Q96NW4 1050 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 DDX50Q9BQ39 737 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 VCXQ9H320 206 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 KLK14Q9P0G3 267 aa12.73□□□□□ -0.37
PTPN7-202ENST00000367279 G3BP2Q9UN86 482 aaKnown RBP12.73□□□□□ -0.37
PTPN7-202ENST00000367279 CCDC78A2IDD5 438 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 FZD9O00144 591 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 SAT1P21673 171 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 PRKCHP24723 683 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 NME3Q13232 169 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 OLIG2Q13516 323 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 CDKL2Q92772 493 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 ATP2A3Q93084 1043 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 PPP1R36Q96LQ0 422 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 C7orf26Q96N11 449 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 KCTD15Q96SI1 283 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-202ENST00000367279 FRMD8Q9BZ67 464 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-202ENST00000367279 PNPLA8Q9NP80 782 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 SCOCQ9UIL1 159 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 USP12O75317 370 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 L1CAMP32004 1257 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 MLH1P40692 756 aa12.72□□□□□ -0.37
PTPN7-202ENST00000367279 OCRLQ01968 901 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms