RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
PRKN-204ENST00000366896 MIPP30301 263 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 DSG1Q02413 1049 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 MMRN1Q13201 1228 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 PLPPR4Q7Z2D5 763 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 KCTD6Q8NC69 237 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 FAM161BQ96MY7 647 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 TUBGCP5Q96RT8 1024 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 CALN1Q9BXU9 219 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 CNTN3Q9P232 1028 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 PTCH2Q9Y6C5 1203 aa15.23■□□□□ 0.03
PRKN-204ENST00000366896 SEPT4O43236 478 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 TRUB2O95900 331 aaKnown RBP15.22■□□□□ 0.03
PRKN-204ENST00000366896 LGALS2P05162 132 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 RBP3P10745 1247 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 ELK3P41970 407 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 KCNJ11Q14654 390 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 RASIP1Q5U651 963 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 IZUMO2Q6UXV1 221 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 NET1Q7Z628 596 aaPredicted RBP15.22■□□□□ 0.03
PRKN-204ENST00000366896 TMPRSS6Q8IU80 811 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 FAM81AQ8TBF8 368 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 RTP4Q96DX8 246 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 SERAC1Q96JX3 654 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 PEBP4Q96S96 227 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 ECSITQ9BQ95 431 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 VCX3BQ9H321 246 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 SMARCAD1Q9H4L7 1026 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 VRTNQ9H8Y1 702 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 VCX3AQ9NNX9 186 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 ASNSD1Q9NWL6 643 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 DNAJB4Q9UDY4 337 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 ZNF180Q9UJW8 692 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 A6NJR5 290 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 ACKR2O00590 384 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 LPXNO60711 386 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 DUSP11O75319 330 aaKnown RBP15.22■□□□□ 0.03
PRKN-204ENST00000366896 CRABP2P29373 138 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 ZNF200P98182 395 aaPredicted RBP15.22■□□□□ 0.03
PRKN-204ENST00000366896 TFDP2Q14188 446 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 FAM47CQ5HY64 1035 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 SH3PXD2AQ5TCZ1 1133 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 EEF1DP3Q658K8 133 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 FAM210AQ96ND0 272 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 UBE2OQ9C0C9 1292 aaKnown RBP15.22■□□□□ 0.03
PRKN-204ENST00000366896 FZD8Q9H461 694 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 SMYD3Q9H7B4 428 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 SIX4Q9UIU6 781 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 TBC1D30Q9Y2I9 924 aa15.22■□□□□ 0.03
PRKN-204ENST00000366896 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.22■□□□□ 0.03
PRKN-204ENST00000366896 ZBTB42B2RXF5 422 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 CXCL8P10145 99 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 MYL2P10916 166 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 CDK7P50613 346 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 CDK18Q07002 472 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 LIN52Q52LA3 116 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 LRRC23Q53EV4 343 aaPredicted RBP15.21■□□□□ 0.03
PRKN-204ENST00000366896 SDCCAG8Q86SQ7 713 aaPredicted RBP15.21■□□□□ 0.03
PRKN-204ENST00000366896 MYLK4Q86YV6 388 aaPredicted RBP15.21■□□□□ 0.03
PRKN-204ENST00000366896 SPATA18Q8TC71 538 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 NDNQ99608 321 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 NMUR2Q9GZQ4 415 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 CYP3A43Q9HB55 503 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 MKS1Q9NXB0 559 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 IL1RAPL1Q9NZN1 696 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 USP18Q9UMW8 372 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 TCRBV9S1A1TA0A576 114 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 C2orf71A6NGG8 1288 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 CAPN14A8MX76 684 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 B2RBV5 119 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 KBTBD13C9JR72 458 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 AVILO75366 819 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 GRK4P32298 578 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 MAGEA6P43360 314 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 ZNF143P52747 638 aaPredicted RBP15.21■□□□□ 0.03
PRKN-204ENST00000366896 ROR1Q01973 937 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 FAAP100Q0VG06 881 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 PTK7Q13308 1070 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 DGKDQ16760 1214 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 TRMT5Q32P41 509 aaKnown RBP15.21■□□□□ 0.03
PRKN-204ENST00000366896 KBTBD12Q3ZCT8 623 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 ZNF667Q5HYK9 610 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 RFX8Q6ZV50 586 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 TRAPPC12Q8WVT3 735 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 HAPLN3Q96S86 360 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 C16orf70Q9BSU1 422 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 MIS12Q9H081 205 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 AP5M1Q9H0R1 490 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 ARMCX1Q9P291 453 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 IKBKGQ9Y6K9 419 aa15.21■□□□□ 0.03
PRKN-204ENST00000366896 ANK1P16157 1881 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 HTTP42858 3142 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PIK3R2O00459 728 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 TRDMT1O14717 391 aaKnown RBP15.2■□□□□ 0.02
PRKN-204ENST00000366896 C1QAP02745 245 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 INHAP05111 366 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PYGLP06737 847 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms