RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 RARGP13631 454 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 SPINK2P20155 84 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 CHKAP35790 457 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 SLC8A3P57103 927 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 COG7P83436 770 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 ENPEPQ07075 957 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 STK4Q13043 487 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 SLC14A1Q13336 389 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 ORC1Q13415 861 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 MORC3Q14149 939 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 PLEKHG6Q3KR16 790 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 KMT5BQ4FZB7 885 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-209ENST00000366735 KIAA1211LQ6NV74 962 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
MRPL55-209ENST00000366735 SV2AQ7L0J3 742 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 GATA6Q92908 595 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 JAKMIP2Q96AA8 810 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 ZDHHC5Q9C0B5 715 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
MRPL55-209ENST00000366735 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
MRPL55-209ENST00000366735 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 MAN1B1Q9UKM7 699 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 MSRB2Q9Y3D2 182 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 PCDHB9Q9Y5E1 797 aa13.03□□□□□ -0.32
MRPL55-209ENST00000366735 NYNRINQ9P2P1 1898 aaKnown RBP13.03□□□□□ -0.32
MRPL55-209ENST00000366735 TMEM131Q92545 1883 aa13.02□□□□□ -0.32
MRPL55-209ENST00000366735 CEP295Q9C0D2 2601 aa13.02□□□□□ -0.32
MRPL55-209ENST00000366735 PTPRBP23467 1997 aa13.02□□□□□ -0.32
MRPL55-209ENST00000366735 A0A1W2PQH9 124 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 HYAL3O43820 417 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-209ENST00000366735 RPL13P26373 211 aaKnown RBP13.02□□□□□ -0.33
MRPL55-209ENST00000366735 VAMP7P51809 220 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 DLG4P78352 724 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 IQCB1Q15051 598 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 DPCR1Q3MIW9 517 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 C11orf57Q6ZUT1 292 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-209ENST00000366735 ZNF276Q8N554 614 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 C12orf29Q8N999 325 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 MLKLQ8NB16 471 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 KCTD10Q9H3F6 313 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 CACNA2D2Q9NY47 1150 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 STRIP2Q9ULQ0 834 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 FRYQ5TBA9 3013 aa13.02□□□□□ -0.33
MRPL55-209ENST00000366735 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 TRIM24O15164 1050 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 KLRC4O43908 158 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 SYNCRIPO60506 623 aaKnown RBP13.01□□□□□ -0.33
MRPL55-209ENST00000366735 TBX18O95935 607 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 ACADMP11310 421 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 BMP6P22004 513 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 NR2F2P24468 414 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 CD6P30203 668 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 KIF11P52732 1056 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 ARID5AQ03989 594 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 EIF4HQ15056 248 aaKnown RBP13.01□□□□□ -0.33
MRPL55-209ENST00000366735 NFIL3Q16649 462 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 SPOPLQ6IQ16 392 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 Q6ZNB5 142 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 GPRIN1Q7Z2K8 1008 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 ANKS1BQ7Z6G8 1248 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
MRPL55-209ENST00000366735 MIB1Q86YT6 1006 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 DEFB119Q8N690 84 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 BHMTQ93088 406 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 WBP2Q969T9 261 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 ZNF419Q96HQ0 510 aaPredicted RBP13.01□□□□□ -0.33
MRPL55-209ENST00000366735 FAXDC2Q96IV6 333 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 MRGPRX1Q96LB2 322 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 GTPBP4Q9BZE4 634 aaKnown RBP13.01□□□□□ -0.33
MRPL55-209ENST00000366735 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 TRAF3IP3Q9Y228 551 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 SLC27A6Q9Y2P4 619 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 RAD54BQ9Y620 910 aa13.01□□□□□ -0.33
MRPL55-209ENST00000366735 A0A1B0GTW7 788 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 PRRT4C9JH25 899 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 HHLA1C9JL84 531 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 BIN1O00499 593 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 GREM1O60565 184 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 CILPO75339 1184 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 STC2O76061 302 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 CD58P19256 250 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 OXTRP30559 389 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 IL27RAQ6UWB1 636 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
MRPL55-209ENST00000366735 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms