RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 MAP3K6O95382 1288 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ATP5BP06576 529 aaKnown RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 CSH1P0DML2 217 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 CSH2P0DML3 217 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ACADMP11310 421 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 YBX3P16989 372 aaKnown RBP eCLIP13.84□□□□□ -0.19
LDB3-202ENST00000361373 BDNFP23560 247 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 MIPP30301 263 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 MAPK8P45983 427 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 FOXD4Q12950 439 aaPredicted RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 MTM1Q13496 603 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 LRRC55Q6ZSA7 311 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 SPASTQ9UBP0 616 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 RUVBL2Q9Y230 463 aaKnown RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 E5RJQ4 531 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 KLRC4O43908 158 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 PGK1P00558 417 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 MPOP05164 745 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 TPBGLP0DKB5 382 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 MLH1P40692 756 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 CD151P48509 253 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 GRIK3Q13003 919 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ZACNQ401N2 412 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 DCLRE1AQ6PJP8 1040 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 METTL3Q86U44 580 aaKnown RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 NT5DC3Q86UY8 548 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 WDR41Q9HAD4 459 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 DYRK1BQ9Y463 629 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 PCDHAC2Q9Y5I4 1007 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 CYP2A6P11509 494 aaPredicted RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 ZNF7P17097 686 aaPredicted RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 GP5P40197 560 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 PRKCQQ04759 706 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 TGM3Q08188 693 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 FAM71AQ8IYT1 594 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 NSL1Q96IY1 281 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 SPATA17Q96L03 361 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 GPAMQ9HCL2 828 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 FAM153AQ9UHL3 310 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 IRAK1P51617 712 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 RAD23BP54727 409 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 SPANXN3Q5MJ09 141 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 EIF1ADQ8N9N8 165 aaKnown RBP13.83□□□□□ -0.2
LDB3-202ENST00000361373 ANKRD52Q8NB46 1076 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 IL31RAQ8NI17 732 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 YIPF2Q9BWQ6 316 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 UBA2Q9UBT2 640 aaPredicted RBP13.83□□□□□ -0.2
LDB3-202ENST00000361373 SOX13Q9UN79 622 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 ASTN1O14525 1302 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 C16orf96A6NNT2 1141 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 B2RBV5 119 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 FUT2Q10981 343 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 LGI2Q8N0V4 545 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 SHC3Q92529 594 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 PPP1R36Q96LQ0 422 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 MAGEB18Q96M61 343 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 PGLYRP2Q96PD5 576 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 HTATIP2Q9BUP3 242 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 C2orf49Q9BVC5 232 aaPredicted RBP13.83□□□□□ -0.2
LDB3-202ENST00000361373 SEZ6LQ9BYH1 1024 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 BLOC1S6Q9UL45 172 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 FARP2O94887 1054 aaPredicted RBP13.83□□□□□ -0.2
LDB3-202ENST00000361373 WSCD1Q658N2 575 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 PDPK2PQ6A1A2 396 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 ZNF555Q8NEP9 628 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 OSCP1Q8WVF1 389 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 NFAT5O94916 1531 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 ATP9AO75110 1047 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 SPATA31C1P0DKV0 1188 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 PGAM1P18669 254 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 HECTD3Q5T447 861 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 GRTP1Q5TC63 336 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 MFSD7Q6UXD7 560 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 SGF29Q96ES7 293 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 PDGFDQ9GZP0 370 aaPredicted RBP13.83□□□□□ -0.2
LDB3-202ENST00000361373 RMND5AQ9H871 391 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 RAD18Q9NS91 495 aa13.83□□□□□ -0.2
LDB3-202ENST00000361373 ABCC6O95255 1503 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 CCT8L1PA6NM43 557 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 AIM2O14862 343 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 ZSCAN9O15535 394 aaPredicted RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 ABHD15Q6UXT9 468 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 TOP6BLQ8N6T0 577 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 TUBGCP3Q96CW5 907 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 MYCBPQ99417 103 aaPredicted RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 SYT17Q9BSW7 474 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 C1QTNF7Q9BXJ2 289 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 OR6C75A6NL08 312 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 IFRD1O00458 451 aaPredicted RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 FKBP9O95302 570 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 THRAP10827 490 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 CRABP2P29373 138 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 ZNF280AP59817 542 aaPredicted RBP13.82□□□□□ -0.2
LDB3-202ENST00000361373 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 SGO1Q5FBB7 561 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 FKBP9P1Q75LS8 142 aa13.82□□□□□ -0.2
LDB3-202ENST00000361373 NUP93Q8N1F7 819 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms