RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 GPD2P43304 727 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBA3-202ENST00000361055 CDK18Q07002 472 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 SNX17Q15036 470 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 ATF7IP2Q5U623 682 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 ANO7Q6IWH7 933 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 DNAJC9Q8WXX5 260 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 FAF2Q96CS3 445 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 RTP4Q96DX8 246 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 TAS2R1Q9NYW7 299 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 COPEO14579 308 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 B4GALT5O43286 388 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 KRT37O76014 449 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MICAL2O94851 1124 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 C1QAP02745 245 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 VDRP11473 427 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 BGNP21810 368 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 ATICP31939 592 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 THPOP40225 353 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 VHLP40337 213 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MAGEA6P43360 314 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 PSEN1P49768 467 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 CDH6P55285 790 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 CDH8P55286 799 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MRPS35P82673 323 aaKnown RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 MGAT3Q09327 533 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 RFWD3Q6PCD5 774 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 C4orf22Q6V702 233 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 DSTYKQ6XUX3 929 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MAP7D3Q8IWC1 876 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 TMEM40Q8WWA1 233 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 TTC17Q96AE7 1141 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 OXNAD1Q96HP4 312 aaPredicted RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 RNF157Q96PX1 679 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MIS12Q9H081 205 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 RPF1Q9H9Y2 349 aaKnown RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBA3-202ENST00000361055 TNFSF13BQ9Y275 285 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 PLLPQ9Y342 182 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 H7C0C1 242 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 TSPAN1O60635 241 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 CILPO75339 1184 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 COL6A1P12109 1028 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 ARF4P18085 180 aaPredicted RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 GPD1P21695 349 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 PRKCHP24723 683 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 RAP1GAPP47736 663 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 ATP5OP48047 213 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 PDK2Q15119 407 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 NPNTQ6UXI9 565 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 SLC39A5Q6ZMH5 540 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 ZC3H18Q86VM9 953 aaKnown RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 ARHGAP24Q8N264 748 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 LRRC39Q96DD0 335 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 C7orf26Q96N11 449 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
UBA3-202ENST00000361055 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 ELOVL4Q9GZR5 314 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 MKS1Q9NXB0 559 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 KIAA1257Q9ULG3 409 aa12.84□□□□□ -0.35
UBA3-202ENST00000361055 C2CD4BA6NLJ0 364 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 TRIM49D1C9J1S8 452 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 H0Y3Z8 333 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 FCHO1O14526 889 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 NVLO15381 856 aaKnown RBP12.83□□□□□ -0.36
UBA3-202ENST00000361055 CHRNA1P02708 482 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 ATP5BP06576 529 aaKnown RBP12.83□□□□□ -0.36
UBA3-202ENST00000361055 KRT19P08727 400 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 CTSHP09668 335 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 MYL2P10916 166 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 CDC25CP30307 473 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 AXLP30530 894 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 OCRLQ01968 901 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 GRIK3Q13003 919 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 LBRQ14739 615 aaKnown RBP12.83□□□□□ -0.36
UBA3-202ENST00000361055 FAM26DQ5JW98 314 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 C1orf53Q5VUE5 145 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 ATG16L1Q676U5 607 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 TRIM68Q6AZZ1 485 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 CYP4V2Q6ZWL3 525 aaPredicted RBP12.83□□□□□ -0.36
UBA3-202ENST00000361055 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 PRPF39Q86UA1 669 aaKnown RBP12.83□□□□□ -0.36
UBA3-202ENST00000361055 PLD5Q8N7P1 536 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 MCUQ8NE86 351 aa12.83□□□□□ -0.36
UBA3-202ENST00000361055 ARMC2Q8NEN0 867 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms