RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TTC29Q8NA56 475 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 HPDLQ96IR7 371 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 EURLQ9NYK6 297 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 ATG14Q6ZNE5 492 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 ZNF335Q9H4Z2 1342 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 PSIP1O75475 530 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 S100A2P29034 98 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 EPHB2P29323 1055 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 WEE1P30291 646 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 KCNJ1P48048 391 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 SLC11A2P49281 568 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 TFDP3Q5H9I0 405 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 FAM20CQ8IXL6 584 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 SLC35C2Q9NQQ7 365 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 PDGFCQ9NRA1 345 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 ERICH5Q6P6B1 374 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 MSANTD1Q6ZTZ1 278 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 RACGAP1Q9H0H5 632 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 RP1P56715 2156 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 C21orf2O43822 256 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 NPR3P17342 541 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 PROX1Q92786 737 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 BBS4Q96RK4 519 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 TRIT1Q9H3H1 467 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 CIDEBQ9UHD4 219 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 MGAT4AQ9UM21 535 aa17.74■□□□□ 0.43
CACNA1A-201ENST00000360228 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CYP27B1O15528 508 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 ACSL4O60488 711 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CCNCP24863 283 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 ACLYP53396 1101 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TMEM132BQ14DG7 1078 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TIMM50Q3ZCQ8 353 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 EFHC1Q5JVL4 640 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TMEM132CQ8N3T6 1108 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 UQCRBP14927 111 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 OCLNQ16625 522 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 RASGRP2Q7LDG7 609 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 LRRC6Q86X45 466 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 ATP6V0D2Q8N8Y2 350 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 EMILIN2Q9BXX0 1053 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 MLXQ9UH92 298 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 F5H5T6 163 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CENPCQ03188 943 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 DGCR6Q14129 220 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 PACS1Q6VY07 963 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 EPS8L3Q8TE67 593 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 SLC20A1Q8WUM9 679 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 KCNMA1Q12791 1236 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 FNDC5Q8NAU1 212 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CAB39LQ9H9S4 337 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TAGLN3Q9UI15 199 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 STX16-NPEPL1H3BU86 382 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 STX16O14662 325 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 HIRAP54198 1017 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 PRMT9Q6P2P2 845 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 EXO5Q9H790 373 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 PTPRHQ9HD43 1115 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 ENDOD1O94919 500 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 ODC1P11926 461 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 CCNA2P20248 432 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 USP11P51784 963 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 PCNX4Q63HM2 1172 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 BSDC1Q9NW68 430 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 SLC2A4P14672 509 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 HSD3B2P26439 372 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 HSD17B3P37058 310 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 SLC22A9Q8IVM8 553 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 FMR1NBQ8N0W7 255 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TMEM106CQ9BVX2 250 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 TOR4AQ9NXH8 423 aa17.73■□□□□ 0.43
CACNA1A-201ENST00000360228 ZNF879B4DU55 563 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 TIPINQ9BVW5 301 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 TMEM120AQ9BXJ8 343 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 AHSPQ9NZD4 102 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 SDR42E2A6NKP2 422 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 PRLP01236 227 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 GTF2H1P32780 548 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 ZMYND11Q15326 602 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 FAXCQ5TGI0 409 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 ALKBH2Q6NS38 261 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 LIMD1Q9UGP4 676 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 EFR3BQ9Y2G0 817 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 TDP2O95551 362 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 PTGISQ16647 500 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 CLVS1Q8IUQ0 354 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 PRELID1Q9Y255 219 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 GNA13Q14344 377 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 GDPD5Q8WTR4 605 aa17.72■□□□□ 0.43
CACNA1A-201ENST00000360228 BAIAP2Q9UQB8 552 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms