RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 LINC01553A4QN01 128 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 CNPP09543 421 aaKnown RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 ZDHHC11BP0C7U3 371 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 PSEN1P49768 467 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 VCPP55072 806 aaKnown RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 RBM10P98175 930 aaKnown RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 OASLQ15646 514 aaKnown RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 C9orf50Q5SZB4 431 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 DDX42Q86XP3 938 aaKnown RBP eCLIP24.05■■□□□ 1.44
SDF4-202ENST00000360001 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 GRK7Q8WTQ7 553 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 IFT81Q8WYA0 676 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 CCDC114Q96M63 670 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 TKTL2Q9H0I9 626 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 FEZ2Q9UHY8 353 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 MAGED2Q9UNF1 606 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 DAPK3O43293 454 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 MSI1O43347 362 aaKnown RBP24.04■■□□□ 1.44
SDF4-202ENST00000360001 SEC31AO94979 1220 aaKnown RBP24.04■■□□□ 1.44
SDF4-202ENST00000360001 GOT1P17174 413 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 ARL13BQ3SXY8 428 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 BEND6Q5SZJ8 279 aaPredicted RBP24.04■■□□□ 1.44
SDF4-202ENST00000360001 TMCO3Q6UWJ1 677 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 NPNTQ6UXI9 565 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 ABHD8Q96I13 439 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 ARFGAP3Q9NP61 516 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.04■■□□□ 1.443e-6■■■■□ 23.1
SDF4-202ENST00000360001 LZTS1Q9Y250 596 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 NEU2Q9Y3R4 380 aa24.04■■□□□ 1.44
SDF4-202ENST00000360001 APOL1O14791 398 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 RARGP13631 454 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 HMGA1P17096 107 aaKnown RBP24.03■■□□□ 1.44
SDF4-202ENST00000360001 SEMA3BQ13214 749 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 TMC7Q7Z402 723 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 TCEAL8Q8IYN2 117 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 TRIM31Q9BZY9 425 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 DPH5Q9H2P9 285 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 ALG13Q9NP73 1137 aaKnown RBP24.03■■□□□ 1.44
SDF4-202ENST00000360001 ZNF446Q9NWS9 450 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 MAFFQ9ULX9 164 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 DRG1Q9Y295 367 aaKnown RBP24.03■■□□□ 1.44
SDF4-202ENST00000360001 FAM72CH0Y354 149 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 ARHGEF15O94989 841 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 CXCL14O95715 111 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 ARL4AP40617 200 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 FAM72AQ5TYM5 149 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 FAM72DQ6L9T8 149 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 SYDE1Q6ZW31 735 aaPredicted RBP24.03■■□□□ 1.44
SDF4-202ENST00000360001 FAM72BQ86X60 149 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 RNF34Q969K3 372 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 SERPINB11Q96P15 392 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 C17orf80Q9BSJ5 609 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 UBE2OQ9C0C9 1292 aaKnown RBP24.03■■□□□ 1.44
SDF4-202ENST00000360001 ARHGEF38Q9NXL2 777 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 NFU1Q9UMS0 254 aa24.03■■□□□ 1.44
SDF4-202ENST00000360001 PRRG1O14668 218 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 CSH1P0DML2 217 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 CSH2P0DML3 217 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 MYOGP15173 224 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 TGM2P21980 687 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 ELF1P32519 619 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 CA8P35219 290 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 ALDH1A3P47895 512 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 ERVFC1P60507 584 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 CUL1Q13616 776 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 NOMO1Q15155 1222 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 PPP1R7Q15435 360 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 BRMS1LQ5PSV4 323 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 SPRED2Q7Z698 418 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 EIF1ADQ8N9N8 165 aaKnown RBP24.02■■□□□ 1.44
SDF4-202ENST00000360001 AENQ8WTP8 325 aaKnown RBP24.02■■□□□ 1.44
SDF4-202ENST00000360001 ZNF148Q9UQR1 794 aa24.02■■□□□ 1.44
SDF4-202ENST00000360001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.02■■□□□ 1.43
SDF4-202ENST00000360001 H3BRJ5 948 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 GAS8O95995 478 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 ITGAVP06756 1048 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 ECHS1P30084 290 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 DRG2P55039 364 aaKnown RBP24.02■■□□□ 1.43
SDF4-202ENST00000360001 PTK6Q13882 451 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 FAM109BQ6ICB4 259 aaPredicted RBP24.02■■□□□ 1.43
SDF4-202ENST00000360001 C1orf228Q6PIY5 440 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 P3H4Q92791 437 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 TCF25Q9BQ70 676 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 ARHGEF4Q9NR80 690 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 FAM114A2Q9NRY5 505 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 RWDD3Q9Y3V2 267 aa24.02■■□□□ 1.43
SDF4-202ENST00000360001 GRXCR1A8MXD5 290 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 TBX18O95935 607 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 AMPD1P23109 780 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 DNAJB1P25685 340 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 CCR1P32246 355 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 MAGEA10P43363 369 aaPredicted RBP24.01■■□□□ 1.43
SDF4-202ENST00000360001 LMNB2Q03252 620 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 TWF1Q12792 350 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 PPP2R5DQ14738 602 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 MAP9Q49MG5 647 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 SPPL3Q8TCT6 385 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 MYRFLQ96LU7 910 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 OLA1Q9NTK5 396 aaKnown RBP24.01■■□□□ 1.43
SDF4-202ENST00000360001 ETNK2Q9NVF9 386 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms