RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 NMD3Q96D46 503 aaKnown RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 PABPC5Q96DU9 382 aaKnown RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 RNF103O00237 685 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 JCHAINP01591 159 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 TCN1P20061 433 aaPredicted RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 AVPR1AP37288 418 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 VHLP40337 213 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 ITGA9Q13797 1035 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 TRIP10Q15642 601 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 SH3PXD2AQ5TCZ1 1133 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 SLC27A1Q6PCB7 646 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 ARL10Q8N8L6 244 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 FAM81AQ8TBF8 368 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 HASPINQ8TF76 798 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 SEC14L1Q92503 715 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 USP6NLQ92738 828 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 OXNAD1Q96HP4 312 aaPredicted RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 CELF6Q96J87 481 aaKnown RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 THEGQ9P2T0 379 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 C2orf71A6NGG8 1288 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 B4GALT4O60513 344 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 B3GAT3O94766 335 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TKTL1P51854 596 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 WDR4P57081 412 aaKnown RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 OGDHQ02218 1023 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 KIF19Q2TAC6 998 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TMEM259Q4ZIN3 620 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TAS1R3Q7RTX0 852 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 PLPPR4Q7Z2D5 763 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 STRA8Q7Z7C7 330 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 ATPAF2Q8N5M1 289 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 WDCPQ9H6R7 721 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 PPME1Q9Y570 386 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 MYCP01106 439 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 GRIK1P39086 918 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 PNPLA4P41247 253 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 C4orf50Q6ZRC1 276 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 HERPUD2Q9BSE4 406 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 HMGXB4Q9UGU5 601 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 E9PBE3 544 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 KLHL41O60662 606 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 KLHL2O95198 593 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 COPAP53621 1224 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 ESRRGP62508 458 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 GAD2Q05329 585 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 BST1Q10588 318 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 SPOUT1Q5T280 376 aaKnown RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 LGMNQ99538 433 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 MEI4A8MW99 385 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 NFKBIEO00221 500 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 MSCO60682 206 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 ALADP13716 330 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 WNT7BP56706 349 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 MED21Q13503 144 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 TAF1CQ15572 869 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 GNASQ5JWF2 1037 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 SCUBE1Q8IWY4 988 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 PDCD6IPQ8WUM4 868 aaKnown RBP12.62□□□□□ -0.39
COL20A1-201ENST00000358894 BTBD10Q9BSF8 475 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
COL20A1-201ENST00000358894 RASSF9O75901 435 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 RGS20O76081 388 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 HMBSP08397 361 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 RALBP11234 206 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CETPP11597 493 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 IL1R2P27930 398 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CDK16Q00536 496 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 BNIP1Q12981 228 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 HABP4Q5JVS0 413 aaKnown RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 BBS5Q8N3I7 341 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ITFG2Q969R8 447 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 STRA6Q9BX79 667 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 IARS2Q9NSE4 1012 aaKnown RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CORO1CQ9ULV4 474 aaPredicted RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CHADO15335 359 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 GBE1Q04446 702 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 USP4Q13107 963 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 KPNB1Q14974 876 aaKnown RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 CRELD2Q6UXH1 353 aaPredicted RBP12.61□□□□□ -0.39
COL20A1-201ENST00000358894 SLC4A11Q8NBS3 891 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 STKLD1Q8NE28 680 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 RFWD2Q8NHY2 731 aa12.61□□□□□ -0.39
COL20A1-201ENST00000358894 ATP6V1E2Q96A05 226 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms