RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GBP2P32456 591 aaPredicted RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 ADCY1Q08828 1119 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 BST2Q10589 180 aaKnown RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 SPDYAQ5MJ70 313 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 FBXO47Q5MNV8 452 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 ZC3H18Q86VM9 953 aaKnown RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 VSIG1Q86XK7 387 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 SCUBE3Q8IX30 993 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 PDIK1LQ8N165 341 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 FBXO36Q8NEA4 188 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 FBF1Q8TES7 1133 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 KBTBD7Q8WVZ9 684 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 WDR83Q9BRX9 315 aaKnown RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 FRMD8Q9BZ67 464 aaPredicted RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 CD248Q9HCU0 757 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 RNF19AQ9NV58 838 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 CXXC1Q9P0U4 656 aaPredicted RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 USH1CQ9Y6N9 552 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 CHD9Q3L8U1 2897 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 EYSQ5T1H1 3165 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 SMIM28A0A1B0GU29 152 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 MDM4O15151 490 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 XPOTO43592 962 aaKnown RBP14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 HCRTO43612 131 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 SPAG6O75602 509 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 FGBP02675 491 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 RPLP2P05387 115 aaKnown RBP14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 FGFR1P11362 822 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 CCNB1P14635 433 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 CA4P22748 312 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 IL4RP24394 825 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 ADORA2BP29275 332 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 PTPN9P43378 593 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 SF3A3Q12874 501 aaKnown RBP eCLIP14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 LPIN1Q14693 890 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 SETDB1Q15047 1291 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 BBS9Q3SYG4 887 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 XKR4Q5GH76 650 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 UBXN11Q5T124 520 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 SLC9A4Q6AI14 798 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 ADGRD1Q6QNK2 874 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 Q7L0L9 218 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 FAM228AQ86W67 206 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 CRYBG2Q8N1P7 616 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 NME8Q8N427 588 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 FITM2Q8N6M3 262 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 PQLC3Q8N755 202 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 PLD5Q8N7P1 536 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 LRRC8CQ8TDW0 803 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 TMEM40Q8WWA1 233 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 TSPAN18Q96SJ8 248 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 YY1AP1Q9H869 796 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 NOD2Q9HC29 1040 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 ARHGEF3Q9NR81 526 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 TXLNGQ9NUQ3 528 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 KLK14Q9P0G3 267 aa14.81□□□□□ -0.04
NIPAL3-203ENST00000358028 CFAP69A5D8W1 941 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 KPNA7A9QM74 516 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 M0QZ92 97 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 SPTLC1O15269 473 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 TM9SF1O15321 606 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 EDF1O60869 148 aaKnown RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 SPAG7O75391 227 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 DCTN3O75935 186 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ALADP13716 330 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 CCDC130P13994 396 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 EZRP15311 586 aaKnown RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 KCNE1P15382 129 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ALDH3A1P30838 453 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 SSTR1P30872 391 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 SCNN1AP37088 669 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PNPLA4P41247 253 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 BCAT1P54687 386 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 NRLP54845 237 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 HDAC4P56524 1084 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 KCNJ11Q14654 390 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 CA9Q16790 459 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PLEKHG4Q58EX7 1191 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 HHATQ5VTY9 493 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ASRGL1Q7L266 308 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 TBC1D1Q86TI0 1168 aaPredicted RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ECHDC2Q86YB7 292 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 DEFB123Q8N688 67 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ANKRD52Q8NB46 1076 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 DBF4BQ8NFT6 615 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ZNF398Q8TD17 642 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 HERVK_113Q902F9 699 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 KLHL29Q96CT2 875 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PAIP2Q9BPZ3 127 aaKnown RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ZNF670Q9BS34 389 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 B3GNT5Q9BYG0 378 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 DNAI2Q9GZS0 605 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 SNX25Q9H3E2 840 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 GDAP2Q9NXN4 497 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PHTF1Q9UMS5 762 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 CHD7Q9P2D1 2997 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 ZNF487B1APH4 448 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 PDGFRBP09619 1106 aa14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 GNL1P36915 607 aaPredicted RBP14.8□□□□□ -0.04
NIPAL3-203ENST00000358028 RPL34P49207 117 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms