RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RRN3Q9NYV6 651 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 COMTP21964 271 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 RDXP35241 583 aaKnown RBP26.42■■□□□ 1.82
SSBP3-202ENST00000357475 TAS2R40P59535 323 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 ZC3H12AQ5D1E8 599 aaKnown RBP26.42■■□□□ 1.82
SSBP3-202ENST00000357475 FAM78AQ5JUQ0 283 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 DAAM2Q86T65 1068 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 ARID3BQ8IVW6 561 aaPredicted RBP26.42■■□□□ 1.82
SSBP3-202ENST00000357475 RNF10Q8N5U6 811 aaKnown RBP26.42■■□□□ 1.82
SSBP3-202ENST00000357475 TTC16Q8NEE8 873 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 RSPRY1Q96DX4 576 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 SLC39A13Q96H72 371 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 NECTIN4Q96NY8 510 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 CDH7Q9ULB5 785 aa26.42■■□□□ 1.82
SSBP3-202ENST00000357475 IGLV3-27P01718 113 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 MIPP30301 263 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 AVPR1AP37288 418 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 TBX4P57082 545 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 TRIP4Q15650 581 aaPredicted RBP26.41■■□□□ 1.82
SSBP3-202ENST00000357475 LEXMQ3ZCV2 418 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 TXNRD3NBQ6F5E7 133 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 CC2D1AQ6P1N0 951 aaPredicted RBP26.41■■□□□ 1.82
SSBP3-202ENST00000357475 CYP4V2Q6ZWL3 525 aaPredicted RBP26.41■■□□□ 1.82
SSBP3-202ENST00000357475 MAGEB5Q9BZ81 275 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 PCSK1NQ9UHG2 260 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 XPO7Q9UIA9 1087 aaKnown RBP26.41■■□□□ 1.82
SSBP3-202ENST00000357475 TLR6Q9Y2C9 796 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 ALG6Q9Y672 507 aa26.41■■□□□ 1.82
SSBP3-202ENST00000357475 STC2O76061 302 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 PFKLP17858 780 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 IL1R2P27930 398 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 GBP2P32456 591 aaPredicted RBP26.4■■□□□ 1.82
SSBP3-202ENST00000357475 CXCR3P49682 368 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 C11orf63Q6NUN7 778 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 SCYL2Q6P3W7 929 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 CCDC185Q8N715 623 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 ASB16Q96NS5 453 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 ARHGAP26Q9UNA1 814 aa26.4■■□□□ 1.82
SSBP3-202ENST00000357475 FTCDO95954 541 aa26.39■■□□□ 1.82
SSBP3-202ENST00000357475 MAN1A1P33908 653 aa26.39■■□□□ 1.82
SSBP3-202ENST00000357475 VIPR2P41587 438 aa26.39■■□□□ 1.82
SSBP3-202ENST00000357475 SLFN11Q7Z7L1 901 aa26.39■■□□□ 1.82
SSBP3-202ENST00000357475 LRRC3BQ96PB8 259 aa26.39■■□□□ 1.82
SSBP3-202ENST00000357475 HBS1LQ9Y450 684 aaKnown RBP26.39■■□□□ 1.82
SSBP3-202ENST00000357475 SOBPA7XYQ1 873 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 LEFTY2O00292 366 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 GREM1O60565 184 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 RNF8O76064 485 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 KLKB1P03952 638 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 FCARP24071 287 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 GBP1P32455 592 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 SLC25A11Q02978 314 aaKnown RBP26.39■■□□□ 1.81
SSBP3-202ENST00000357475 SH3RF2Q8TEC5 729 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 ACSF2Q96CM8 615 aaPredicted RBP26.39■■□□□ 1.81
SSBP3-202ENST00000357475 TDP1Q9NUW8 608 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 GDE1Q9NZC3 331 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 CFAP97Q9P2B7 532 aa26.39■■□□□ 1.81
SSBP3-202ENST00000357475 MOCS2O96007 188 aaPredicted RBP26.38■■□□□ 1.81
SSBP3-202ENST00000357475 TNNT1P13805 278 aa26.38■■□□□ 1.81
SSBP3-202ENST00000357475 SSR1P43307 286 aaKnown RBP26.38■■□□□ 1.81
SSBP3-202ENST00000357475 NNTQ13423 1086 aa26.38■■□□□ 1.81
SSBP3-202ENST00000357475 ACAP1Q15027 740 aa26.38■■□□□ 1.81
SSBP3-202ENST00000357475 RNF34Q969K3 372 aa26.38■■□□□ 1.81
SSBP3-202ENST00000357475 GPATCH2LQ9NWQ4 482 aa26.38■■□□□ 1.81
SSBP3-202ENST00000357475 PACSIN2Q9UNF0 486 aaPredicted RBP26.38■■□□□ 1.81
SSBP3-202ENST00000357475 SNX10Q9Y5X0 201 aa26.38■■□□□ 1.81
SSBP3-202ENST00000357475 KCNU1A8MYU2 1149 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 F9P00740 461 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 LAMP2P13473 410 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 PCK1P35558 622 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 COG7P83436 770 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 IFI16Q16666 785 aaKnown RBP26.37■■□□□ 1.81
SSBP3-202ENST00000357475 SMTNL2Q2TAL5 461 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 PTCRAQ6ISU1 281 aaPredicted RBP26.37■■□□□ 1.81
SSBP3-202ENST00000357475 SMARCD2Q92925 531 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 TKTL2Q9H0I9 626 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 WDCPQ9H6R7 721 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 ZWILCHQ9H900 591 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 USP18Q9UMW8 372 aa26.37■■□□□ 1.81
SSBP3-202ENST00000357475 SPOPO43791 374 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 IL9P15248 144 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 CORO1AP31146 461 aaKnown RBP26.36■■□□□ 1.81
SSBP3-202ENST00000357475 GJC1P36383 396 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 GGCXP38435 758 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 MARCKSL1P49006 195 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 RING1Q06587 406 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 ATP13A4Q4VNC1 1196 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 KCNT1Q5JUK3 1230 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 ZNF569Q5MCW4 686 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 NT5DC3Q86UY8 548 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 CALR3Q96L12 384 aaKnown RBP26.36■■□□□ 1.81
SSBP3-202ENST00000357475 ARHGEF38Q9NXL2 777 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 ZMYM5Q9UJ78 669 aa26.36■■□□□ 1.81
SSBP3-202ENST00000357475 GOLGA6L9A6NEM1 432 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 WEE1P30291 646 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 CCR1P32246 355 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 PPP2R5DQ14738 602 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 SMAD2Q15796 467 aaKnown RBP26.35■■□□□ 1.81
SSBP3-202ENST00000357475 ZNF77Q15935 545 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 CA9Q16790 459 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms