RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NUAK2Q9H093 628 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 LRRC19Q9H756 370 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CD248Q9HCU0 757 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 FAM205AQ6ZU69 1335 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 F8W031 263 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PGM3O95394 542 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PAX7P23759 505 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CDH4P55283 916 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PTP4A2Q12974 167 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CHSY1Q86X52 802 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ACOT12Q8WYK0 555 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 C7orf26Q96N11 449 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TUBGCP5Q96RT8 1024 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 NMRAL1Q9HBL8 299 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SONP18583 2426 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 H0YJX3 145 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 KPNA3O00505 521 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PRPF4O43172 522 aaKnown RBP eCLIP6.74□□□□□ -1.334e-6■■■□□ 16.7
VPS13B-202ENST00000357162 SPIRE1Q08AE8 756 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CCDC142Q17RM4 750 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SPATA31D1Q6ZQQ2 1576 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 NIPA1Q7RTP0 329 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ABHD8Q96I13 439 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RTKNQ9BST9 563 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TASP1Q9H6P5 420 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TBC1D13Q9NVG8 400 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 AKT3Q9Y243 479 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 IRAK3Q9Y616 596 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 hCG_2014768A0A024R1R8 64 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ATF6P18850 670 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 HNMTP50135 292 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 USP10Q14694 798 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 LRRC14Q15048 493 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 AKAP14Q86UN6 197 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 IL22Q9GZX6 179 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 VTA1Q9NP79 307 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PADI4Q9UM07 663 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 LZTS1Q9Y250 596 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CEP170BQ9Y4F5 1589 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SNAP23O00161 211 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 DYNC1LI2O43237 492 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 NTRK1P04629 796 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 EIF5AP63241 154 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 AMPD2Q01433 879 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 DNAJC10Q8IXB1 793 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 EPB41L4BQ9H329 900 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RPS6KL1Q9Y6S9 549 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MYO7BQ6PIF6 2116 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MTF1Q14872 753 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CNTD1Q8N815 330 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ARL8AQ96BM9 186 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TBC1D10AQ9BXI6 508 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM120AQ9BXJ8 343 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CDC42EP4Q9H3Q1 356 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 M0QX08 132 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 MVKQ03426 396 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DLG1Q12959 904 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TTLL4Q14679 1199 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HAVCR1Q96D42 359 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 UBA6A0AVT1 1052 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PON1P27169 355 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 AQP5P55064 265 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 LRRC41Q15345 812 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DNAJB8Q8NHS0 232 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 C1orf54Q8WWF1 131 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 SCN2AQ99250 2005 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RGSL1A5PLK6 1076 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 METTL21EPA6NDL7 271 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 MGRN1O60291 552 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PROSCO94903 275 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 IREB2P48200 963 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 SCN1BQ07699 218 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ITGADQ13349 1161 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 LRRC24Q50LG9 513 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PID1Q7Z2X4 250 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 LRRC47Q8N1G4 583 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 APOL6Q9BWW8 343 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TEX13BQ9BXU2 312 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RACGAP1Q9H0H5 632 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 UBE2QL1A1L167 161 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 KPNA5O15131 536 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 REM1O75628 298 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DMPKQ09013 629 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FAM187BQ17R55 369 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PSTKQ8IV42 348 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FAM172AQ8WUF8 416 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 EEF2KMTQ96G04 330 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 NSMCE2Q96MF7 247 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DNAAF2Q9NVR5 837 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TFCP2L1Q9NZI6 479 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 MAGEB3O15480 346 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ATP6AP1LQ52LC2 224 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 AGAP11Q8TF27 550 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TJP2Q9UDY2 1190 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 CCDC182A6NF36 153 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RHOBTB1O94844 696 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 CRTAMO95727 393 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RRP1BQ14684 758 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RBBP7Q16576 425 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms