RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 NT5C3BQ969T7 300 aa18.61■□□□□ 0.57
PDLIM7-202ENST00000355841 LSM7Q9UK45 103 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-202ENST00000355841 AGO1Q9UL18 857 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-202ENST00000355841 STAP1Q9ULZ2 295 aa18.61■□□□□ 0.57
PDLIM7-202ENST00000355841 DUSP12Q9UNI6 340 aa18.61■□□□□ 0.57
PDLIM7-202ENST00000355841 TLR6Q9Y2C9 796 aa18.61■□□□□ 0.57
PDLIM7-202ENST00000355841 ANKRD62A6NC57 917 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 ARNTLO00327 626 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 CHADO15335 359 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 MOCS2O96007 188 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 IGLV3-27P01718 113 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 H2AFZP0C0S5 128 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 SRFP11831 508 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 GPD1P21695 349 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 SDC4P31431 198 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 IFNAR2P48551 515 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 HARS2P49590 506 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 VCPP55072 806 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 EIF4EBP2Q13542 120 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 Q6ZNB5 142 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 H2AFVQ71UI9 128 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 ARCQ7LC44 396 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 RNF34Q969K3 372 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 PLD4Q96BZ4 506 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 SLC39A13Q96H72 371 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 COL25A1Q9BXS0 654 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 HPS4Q9NQG7 708 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 XPO7Q9UIA9 1087 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 EPN1Q9Y6I3 576 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 NDUFA10O95299 355 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 CYP1A2P05177 515 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 DEUP1Q05D60 604 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 EML3Q32P44 896 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 CTNNBL1Q8WYA6 563 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 BTBD6Q96KE9 485 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 NUP85Q9BW27 656 aa18.6■□□□□ 0.57
PDLIM7-202ENST00000355841 NCOR1O75376 2440 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 TMEM191CA6NGB0 347 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 TRDMT1O14717 391 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 GBP1P32455 592 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 SOX9P48436 509 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 ZNF252P-AS1Q0IIN9 211 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 ADGRG2Q8IZP9 1017 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 ACRBPQ8NEB7 543 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 IRF7Q92985 503 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 TMPRSS4Q9NRS4 437 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 HEBP1Q9NRV9 189 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 RRN3Q9NYV6 651 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 PCDHA13Q9Y5I0 950 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 SCINQ9Y6U3 715 aa18.59■□□□□ 0.57
PDLIM7-202ENST00000355841 GOLGA6L7A0A1B0GV03 622 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 CCP110O43303 1012 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 LCA5LO95447 670 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 MAGEA1P43355 309 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 ZNF143P52747 638 aaPredicted RBP18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 RING1Q06587 406 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 NNTQ13423 1086 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 SPA17Q15506 151 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 LRRC8AQ8IWT6 810 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 FAM172AQ8WUF8 416 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 BHMTQ93088 406 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 DESI2Q9BSY9 194 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 MRPL47Q9HD33 250 aaKnown RBP18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 ANLNQ9NQW6 1124 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 SLC2A4RGQ9NR83 387 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 TBC1D14Q9P2M4 693 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 CA14Q9ULX7 337 aa18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 REXO2Q9Y3B8 237 aaKnown RBP18.58■□□□□ 0.57
PDLIM7-202ENST00000355841 EIF3CLB5ME19 914 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 I6L893 689 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 TMEM253P0C7T8 217 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 PSMA2P25787 234 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 CCR1P32246 355 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 RDXP35241 583 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 PTPN9P43378 593 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 RUNX3Q13761 415 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 PDGFRLQ15198 375 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 DAB2IPQ5VWQ8 1189 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 NUGGCQ68CJ6 796 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 TPGS1Q6ZTW0 290 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 BNIPLQ7Z465 357 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 FAM131BQ86XD5 332 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 TMEM25Q86YD3 366 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 ATP2A3Q93084 1043 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 PGAP3Q96FM1 320 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 P2RY11Q96G91 374 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 EIF3CQ99613 913 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 DCLK3Q9C098 648 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 ECT2Q9H8V3 914 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 OSGEPQ9NPF4 335 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 CTTNBP2NLQ9P2B4 639 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 KCNU1A8MYU2 1149 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 SLC9A3R1O14745 358 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 DCXO43602 365 aa18.57■□□□□ 0.56
PDLIM7-202ENST00000355841 APOEP02649 317 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms