RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PWP1Q13610 501 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 GIT2Q14161 759 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 HIST2H2ACQ16777 129 aaPredicted RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 HIST2H2AA3Q6FI13 130 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 CYP2R1Q6VVX0 501 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 KBTBD2Q8IY47 623 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 AGXT2Q9BYV1 514 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 UBXN6Q9BZV1 441 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 STN1Q9H668 368 aaKnown RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 USP21Q9UK80 565 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 AP3M1Q9Y2T2 418 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 A0A0G2JLW4 131 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ETS1P14921 441 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SSTR1P30872 391 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC16A1P53985 500 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 NFIL3Q16649 462 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 DGKKQ5KSL6 1271 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SIX5Q8N196 739 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SFRP1Q8N474 314 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ETNPPLQ8TBG4 499 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 KBTBD13C9JR72 458 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 AREL1O15033 823 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 RASA1P20936 1047 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 MAPK10P53779 464 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ATF7IP2Q5U623 682 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 TYW3Q6IPR3 259 aaKnown RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 POC5Q8NA72 575 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZSCAN18Q8TBC5 510 aaPredicted RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 FIG4Q92562 907 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 AKAP3O75969 853 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 FOLH1Q04609 750 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAAP100Q0VG06 881 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 MAD2L1Q13257 205 aaPredicted RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 FRG1Q14331 258 aaKnown RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZFYVE16Q7Z3T8 1539 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 TET3O43151 1660 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 H7C0S8 307 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 PMPCBO75439 489 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC47A2Q86VL8 602 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 MIER2Q8N344 545 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 PIWIL2Q8TC59 973 aaKnown RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 UTP15Q8TED0 518 aaKnown RBP13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 ANAPC2Q9UJX6 822 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 CHKBQ9Y259 395 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 GMEB1Q9Y692 573 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ANXA6P08133 673 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 UQCRBP14927 111 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 PGAM1P18669 254 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 BLMHQ13867 455 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 SV2CQ496J9 727 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 PCYOX1Q9UHG3 505 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 SHBGP04278 402 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 VDRP11473 427 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 CRABP2P29373 138 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 PRKCEQ02156 737 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 CSHL1Q14406 222 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 SPANXN3Q5MJ09 141 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 PLA2G4FQ68DD2 849 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 TIGD7Q6NT04 549 aaPredicted RBP13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAM228AQ86W67 206 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 MRPL39Q9NYK5 338 aaKnown RBP13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 EHD3Q9NZN3 535 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 C2CD2LO14523 706 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 PDGFRBP09619 1106 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 CCNHP51946 323 aaPredicted RBP13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ELMOD1Q8N336 334 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ACTRT2Q8TDY3 377 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 CLK4Q9HAZ1 481 aaKnown RBP13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAM220BPB1ANY3 271 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 GARTP22102 1010 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ITFG1Q8TB96 612 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ASB2Q96Q27 587 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 POLR1BQ9H9Y6 1135 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 IQGAP3Q86VI3 1631 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 CCDC154A6NI56 674 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 TSHRP16473 764 aa13.03□□□□□ -0.32
SYNCRIP-201ENST00000355238 ELMSAN1Q6PJG2 1045 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms