RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GRIK3Q13003 919 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 HIF1AQ16665 826 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TIGD5Q53EQ6 642 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 RAB6CQ53S08 254 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TFDP3Q5H9I0 405 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 FNBP1LQ5T0N5 605 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 ANKRD22Q5VYY1 191 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 ANO7Q6IWH7 933 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 SLC39A5Q6ZMH5 540 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 RFWD2Q8NHY2 731 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TCP10LQ8TDR4 215 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 NT5C1AQ9BXI3 368 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 RAB6CQ9H0N0 254 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TMEM30AQ9NV96 361 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TSPAN16Q9UKR8 245 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 GIT1Q9Y2X7 761 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 LRRD1A4D1F6 860 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 GOLGA8RI6L899 631 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 ZWINTO95229 277 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 LINGO3P0C6S8 592 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 HSPA8P11142 646 aaKnown RBP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 ITGB8P26012 769 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 CYP2C18P33260 490 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PEX19P40855 299 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 BRCC3P46736 316 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 LBX1P52954 281 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PSMC1P62191 440 aaKnown RBP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 FAM189BP81408 668 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TLE2Q04725 743 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TRIM60Q495X7 471 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 KHDC1Q4VXA5 237 aaKnown RBP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 SPDYAQ5MJ70 313 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 WASHC2DQ5SRD0 308 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PPP1R15BQ5SWA1 713 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TRNP1Q6NT89 227 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PMF1Q6P1K2 205 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 RFWD3Q6PCD5 774 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 C3orf62Q6ZUJ4 267 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PAQR9Q6ZVX9 377 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 MICAL3Q7RTP6 2002 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 JOSD2Q8TAC2 188 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 MZB1Q8WU39 189 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PTPRN2Q92932 1015 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 NKD2Q969F2 451 aaPredicted RBP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 KLF6Q99612 283 aaPredicted RBP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 OSBPL1AQ9BXW6 950 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 LHX5Q9H2C1 402 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TLE6Q9H808 572 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PCDH9Q9HC56 1237 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 SLC17A7Q9P2U7 560 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 LNPEPQ9UIQ6 1025 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 SQORQ9Y6N5 450 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 FNDC1Q4ZHG4 1894 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 TANC1Q9C0D5 1861 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 A8MXQ7 604 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 M0QYV0 167 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CLDN5O00501 218 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CYB561D2O14569 222 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ENPP3O14638 875 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 BEST1O76090 585 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 VDRP11473 427 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 COL6A1P12109 1028 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ATP6V1C1P21283 382 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 GNL1P36915 607 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CTCFP49711 727 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 RGS7P49802 495 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 TAF5Q15542 800 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 LRRC38Q5VT99 294 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 FYB2Q5VWT5 728 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CRIPAKQ8N1N5 446 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ARFGAP1Q8N6T3 406 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 TMEM35BQ8NCS4 154 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 SLC35B2Q8TB61 432 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 PYROXD1Q8WU10 500 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CPT1BQ92523 772 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 SENP8Q96LD8 212 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 PAFAH2Q99487 392 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 RTP3Q9BQQ7 232 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 DHRS4Q9BTZ2 278 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 PPCSQ9HAB8 311 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ALG13Q9NP73 1137 aaKnown RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 SSU72Q9NP77 194 aaKnown RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ZFATQ9P243 1243 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 DNAJB4Q9UDY4 337 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 A0A0G2JND7 137 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 PPP1R12AO14974 1030 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 P4HA1P13674 534 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 PTPN7P35236 360 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 RFC1P35251 1148 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 DYNLT1P63172 113 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ZC3H12AQ5D1E8 599 aaKnown RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 DCUN1D2Q6PH85 259 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 LCLAT1Q6UWP7 414 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 DSTYKQ6XUX3 929 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 C4orf50Q6ZRC1 276 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms