RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ZCCHC9Q8N567 271 aaKnown RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 DIS3LQ8TF46 1054 aaKnown RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 GBA2Q9HCG7 927 aaPredicted RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 NCAM2O15394 837 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 RBP1P09455 135 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 ZNF23P17027 643 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 UBA1P22314 1058 aaKnown RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 CCR1P32246 355 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 MMP14P50281 582 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 SCNN1BP51168 640 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 AARS2Q5JTZ9 985 aaKnown RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 CCDC81Q6ZN84 652 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 ZNF75CPQ92670 426 aaPredicted RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 UTP6Q9NYH9 597 aaKnown RBP16.44■□□□□ 0.22
PTPN11-201ENST00000351677 VPS28Q9UK41 221 aa16.44■□□□□ 0.22
PTPN11-201ENST00000351677 GHRP10912 638 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ADCYAP1R1P41586 468 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 DPYSL3Q14195 570 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 C15orf59Q2T9L4 293 aaPredicted RBP16.43■□□□□ 0.22
PTPN11-201ENST00000351677 NPNTQ6UXI9 565 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ARMCX1Q9P291 453 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 FCHO1O14526 889 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 APOA1P02647 267 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 CKMP06732 381 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
PTPN11-201ENST00000351677 TBL3Q12788 808 aaKnown RBP16.43■□□□□ 0.22
PTPN11-201ENST00000351677 AGKQ53H12 422 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PGM2Q96G03 612 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PIF1Q9H611 641 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 SOX13Q9UN79 622 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 GLRA2P23416 452 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 KDELR1P24390 212 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PCYT1AP49585 367 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 GTF2BQ00403 316 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ATP13A4Q4VNC1 1196 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ZCWPW2Q504Y3 356 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ZDHHC17Q8IUH5 632 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 USP1O94782 785 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 CRTAMO95727 393 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PGAM1P18669 254 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 GP5P40197 560 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 IZUMO2Q6UXV1 221 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 C11orf74Q86VG3 221 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 IL31RAQ8NI17 732 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PGLYRP2Q96PD5 576 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN11-201ENST00000351677 USP12O75317 370 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 MPOP05164 745 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 ADRA1DP25100 572 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 UBE3AQ05086 875 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 CDH17Q12864 832 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 DGKZQ13574 1117 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 MARC1Q5VT66 337 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PRPF18Q99633 342 aaKnown RBP16.43■□□□□ 0.22
PTPN11-201ENST00000351677 CLPBQ9H078 707 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 MYLK2Q9H1R3 596 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 TBC1D13Q9NVG8 400 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 SCN3BQ9NY72 215 aa16.43■□□□□ 0.22
PTPN11-201ENST00000351677 PTPRAP18433 802 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 HSPA13P48723 471 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 KPNB1Q14974 876 aaKnown RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 GRTP1Q5TC63 336 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 MYO1HQ8N1T3 1032 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 TMEM161BQ8NDZ6 487 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 USP6NLQ92738 828 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 APOC4-APOC2K7ER74 178 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 CBX6O95503 412 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 APOC2P02655 101 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 CYP1A2P05177 515 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 RPA3P35244 121 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 TRPC1P48995 793 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 RHOAP61586 193 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 MFSD10Q14728 455 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 P3H2Q8IVL5 708 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 PGBD3Q8N328 593 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 DDI1Q8WTU0 396 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 OXNAD1Q96HP4 312 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 EXOSC4Q9NPD3 245 aaKnown RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 TCF7L2Q9NQB0 619 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 KDM1AO60341 852 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 VSIG10LQ86VR7 867 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 POU5F2Q8N7G0 328 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 COPS5Q92905 334 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 SLC7A5P2Q9GIP4 190 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 PDP2Q9P2J9 529 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 DEAF1O75398 565 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 NR2C2P49116 596 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 TUBP50607 506 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 SLCO1B7G3V0H7 640 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 RNF225M0QZC1 329 aaPredicted RBP16.42■□□□□ 0.22
PTPN11-201ENST00000351677 SERPINE1P05121 402 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 CD151P48509 253 aa16.42■□□□□ 0.22
PTPN11-201ENST00000351677 NEK2P51955 445 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms