RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PABPC1LQ4VXU2 614 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ZCCHC9Q8N567 271 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ZSWIM2Q8NEG5 633 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SKA2Q8WVK7 121 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 CDC42EP4Q9H3Q1 356 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 NXF3Q9H4D5 531 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 CHN1P15882 459 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 TYMPP19971 482 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 MMEL1Q495T6 779 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 HTR3CQ8WXA8 447 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 FAM167BQ9BTA0 163 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 WDR91A4D1P6 747 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 TIMM44O43615 452 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 SH3BP5O60239 455 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 H2AFYO75367 372 aaKnown RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 ARIH2O95376 493 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 MATKP42679 507 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 BTG3Q14201 252 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 WWP1Q9H0M0 922 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 F8VP50 259 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 CHADO15335 359 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 MAN1A2O60476 641 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 SLC10A3P09131 477 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 BLVRAP53004 296 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 ARFIP2P53365 341 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 FSTL1Q12841 308 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 BRMS1LQ5PSV4 323 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 FRA10AC1Q70Z53 315 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 AGAP3Q96P47 875 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 TMEM121Q9BTD3 319 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 EIF2AQ9BY44 585 aaKnown RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 TRIM54Q9BYV2 358 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 ARL2BPQ9Y2Y0 163 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 SLC4A1P02730 911 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 PYGLP06737 847 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 ESRRAP11474 423 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 VSTM1Q6UX27 236 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 PRKD2Q9BZL6 878 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 MYH8P13535 1937 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 E5RI56 91 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 TRDMT1O14717 391 aaKnown RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 ZNF263O14978 683 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 MBL2P11226 248 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 PDCD6IPQ8WUM4 868 aaKnown RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 C20orf96Q9NUD7 363 aaPredicted RBP12.53□□□□□ -0.4
SMAD9-201ENST00000350148 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
SMAD9-201ENST00000350148 CCDC15Q0P6D6 951 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 USP33Q8TEY7 942 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 RNF157Q96PX1 679 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 FAM118BQ9BPY3 351 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 KLC4Q9NSK0 619 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 TIMM13Q9Y5L4 95 aaPredicted RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 CFAP73A6NFT4 308 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 LIASO43766 372 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 RPL21P46778 160 aaKnown RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 RAD23BP54727 409 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 GJA9P57773 515 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 FAM35AQ86V20 835 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 IFNLR1Q8IU57 520 aaPredicted RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 MAML1Q92585 1016 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 LMCD1Q9NZU5 365 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 HES2Q9Y543 173 aa12.52□□□□□ -0.4
SMAD9-201ENST00000350148 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.52□□□□□ -0.4
SMAD9-201ENST00000350148 SYN3O14994 580 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 BAG2O95816 211 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 ABHD2P08910 425 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 TCEAL1Q15170 157 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 KCTD19Q17RG1 926 aaPredicted RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 CCDC149Q6ZUS6 474 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SLC26A11Q86WA9 606 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 IPMKQ8NFU5 416 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SPPL2BQ8TCT7 592 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 DYRK4Q9NR20 520 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SRRDQ9UH36 339 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 PADI3Q9ULW8 664 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 DDX3YO15523 660 aaKnown RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 LMNAP02545 664 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms