RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 I6L893 689 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 PITPNM1O00562 1244 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 TNFRSF10BO14763 440 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 SYN3O14994 580 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 DCLK1O15075 740 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 GCATO75600 419 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 F9P00740 461 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 IVLP07476 585 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 USP17L7P0C7H9 530 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 GOT1P17174 413 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 BDNFP23560 247 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 GCAP28676 217 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 RBL1P28749 1068 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 ARL4AP40617 200 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 CXCR3P49682 368 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 ZNF135P52742 658 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 RABGGTBP53611 331 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 NRLP54845 237 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 GPX6P59796 221 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 TSPY1Q01534 308 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 GUCY1A3Q02108 690 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 GAD2Q05329 585 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 RNASELQ05823 741 aaKnown RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 PDIA2Q13087 525 aaKnown RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 BFSP2Q13515 415 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 FASTKD3Q14CZ7 662 aaKnown RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 PAFAH1B3Q15102 231 aaKnown RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 HIF1AQ16665 826 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 LONRF1Q17RB8 773 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 MSS51Q4VC12 460 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 PPP6R3Q5H9R7 873 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 FNBP1LQ5T0N5 605 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 LEKR1Q6ZMV7 388 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 EXOC3L1Q86VI1 746 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 ZC3H18Q86VM9 953 aaKnown RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC13Q8IYE1 715 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 PYROXD2Q8N2H3 581 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 RIBC1Q8N443 379 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 MCUQ8NE86 351 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 URGCPQ8TCY9 931 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 HASPINQ8TF76 798 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 RNF139Q8WU17 664 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 MAML1Q92585 1016 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 CASD1Q96PB1 797 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 RHOBTB2Q9BYZ6 727 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 FRMD8Q9BZ67 464 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 CENPHQ9H3R5 247 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 ANLNQ9NQW6 1124 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 ARHGEF4Q9NR80 690 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 ETNK2Q9NVF9 386 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 DTLQ9NZJ0 730 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 BCCIPQ9P287 314 aaKnown RBP eCLIP7.17□□□□□ -1.26
TRIM55-203ENST00000350034 FETUBQ9UGM5 382 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 FBXW11Q9UKB1 542 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 TSC2P49815 1807 aa7.17□□□□□ -1.26
TRIM55-203ENST00000350034 FRMPD3Q5JV73 1810 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 KCNN4O15554 427 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 CDH16O75309 829 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 ZNF189O75820 626 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 CXCL10P02778 98 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 AMHP03971 560 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 VAV1P15498 845 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 FGFR3P22607 806 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 ATP5DP30049 168 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 HPDP32754 393 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 MAGEA3P43357 314 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 MAGEA11P43364 429 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 SLCO1A2P46721 670 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 GLUD2P49448 558 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 YWHAHQ04917 246 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 PRKD1Q15139 912 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 ZSCAN26Q16670 478 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TCTN1Q2MV58 587 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 EFHC2Q5JST6 749 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 ARTNQ5T4W7 220 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 BSPRYQ5W0U4 402 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TTC19Q6DKK2 380 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 KCNT2Q6UVM3 1135 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 PPP1R21Q6ZMI0 780 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 C4orf50Q6ZRC1 276 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 RFX8Q6ZV50 586 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 B4GALNT4Q76KP1 1039 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 BZW1Q7L1Q6 419 aaKnown RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 CTU1Q7Z7A3 348 aaKnown RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 SCD5Q86SK9 330 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 DCP1BQ8IZD4 617 aaKnown RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 DBF4BQ8NFT6 615 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 SLC7A14Q8TBB6 771 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 DQX1Q8TE96 717 aaKnown RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 SEPT8Q92599 483 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 APBB2Q92870 758 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 FUBP3Q96I24 572 aaKnown RBP eCLIP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 C8orf48Q96LL4 319 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 XPO6Q96QU8 1125 aaKnown RBP7.16□□□□□ -1.26
TRIM55-203ENST00000350034 CCDC77Q9BR77 488 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 DHRS4Q9BTZ2 278 aa7.16□□□□□ -1.26
TRIM55-203ENST00000350034 TRIM62Q9BVG3 475 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms