RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CSPG4P5Q96PW8 444 aa6.26□□□□□ -1.41
CLCN3-201ENST00000347613 NT5C1AQ9BXI3 368 aa6.26□□□□□ -1.41
CLCN3-201ENST00000347613 DHX35Q9H5Z1 703 aaKnown RBP6.26□□□□□ -1.41
CLCN3-201ENST00000347613 ASNSD1Q9NWL6 643 aa6.26□□□□□ -1.41
CLCN3-201ENST00000347613 ZFP69BQ9UJL9 534 aa6.26□□□□□ -1.41
CLCN3-201ENST00000347613 RALGAPA2Q2PPJ7 1873 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 GSC2O15499 205 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PRPSAP2O60256 369 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ZWINTO95229 277 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ARSAP15289 507 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PRKCHP24723 683 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ABCD1P33897 745 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 BCAR1P56945 870 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TUBB3Q13509 450 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 KPNB1Q14974 876 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PLD6Q8N2A8 252 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 OR6B3Q8NGW1 331 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 CCHCR1Q8TD31 782 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 DCPSQ96C86 337 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 APOPT1Q96IL0 206 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SNX27Q96L92 541 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 KCNK16Q96T55 309 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TSSK1BQ9BXA7 367 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 FOXP3Q9BZS1 431 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ADARB2Q9NS39 739 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PCMTD2Q9NV79 361 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 KIAA1522Q9P206 1035 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ZC3H7BQ9UGR2 993 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PLLPQ9Y342 182 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 WASF2Q9Y6W5 498 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SZT2Q5T011 3432 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 CAPN14A8MX76 684 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 MT-ND3P03897 115 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 MMP3P08254 477 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 KRT81Q14533 505 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TTLL4Q14679 1199 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 UBXN11Q5T124 520 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ARTNQ5T4W7 220 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 C9orf57Q5W0N0 161 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 CCDC91Q7Z6B0 441 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PDCD7Q8N8D1 485 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 WNT8BQ93098 351 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 CYTH2Q99418 400 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SHCBP1LQ9BZQ2 653 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ASB7Q9H672 318 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TLE6Q9H808 572 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TIMM13Q9Y5L4 95 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PPP2R3BQ9Y5P8 575 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 BCLAF3A2AJT9 711 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 MEI4A8MW99 385 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 BTBD19C9JJ37 291 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 F8W810 466 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 GOLGA8TH3BQL2 631 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 APOL1O14791 398 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 CHADO15335 359 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 TREHO43280 583 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 DGKIO75912 1065 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 RECQL4O94761 1208 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 OCRLQ01968 901 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 WASHC5Q12768 1159 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 DLG2Q15700 870 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SLC45A4Q5BKX6 768 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 C4orf50Q6ZRC1 276 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PCGF5Q86SE9 256 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 ANKRD13AQ8IZ07 590 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 NPWQ8N729 165 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 C3orf58Q8NDZ4 430 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 STKLD1Q8NE28 680 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PPTC7Q8NI37 304 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 DTX3LQ8TDB6 740 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 UCMAQ8WVF2 138 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 OLFM3Q96PB7 478 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 AGAP2Q99490 1192 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 VPS11Q9H270 941 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SSU72Q9NP77 194 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 PIGVQ9NUD9 493 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 MOCS1Q9NZB8 636 aa6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SPTBN5Q9NRC6 3674 aaKnown RBP6.25□□□□□ -1.41
CLCN3-201ENST00000347613 SMIM28A0A1B0GU29 152 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 CCDC78A2IDD5 438 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 KCNK1O00180 336 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 PIRO00625 290 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 TRAFD1O14545 582 aaPredicted RBP6.24□□□□□ -1.41
CLCN3-201ENST00000347613 TBX10O75333 385 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 SLC25A27O95847 323 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 ERVK-10P10266 1014 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 MLH1P40692 756 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 SKIV2L2P42285 1042 aaKnown RBP6.24□□□□□ -1.41
CLCN3-201ENST00000347613 PTDSS1P48651 473 aaKnown RBP6.24□□□□□ -1.41
CLCN3-201ENST00000347613 NUMBP49757 651 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 RBP5P82980 135 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 CCL14Q16627 93 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 NAPRTQ6XQN6 538 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 CMC1Q7Z7K0 106 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 DEFB106AQ8N104 65 aa6.24□□□□□ -1.41
CLCN3-201ENST00000347613 SLC25A41Q8N5S1 370 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms