RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CDK18Q07002 472 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 TGFBIQ15582 683 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 TDRD10Q5VZ19 366 aaKnown RBP15.82■□□□□ 0.12
LMNA-201ENST00000347559 OGFOD2Q6N063 350 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 BBS12Q6ZW61 710 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 C10orf107Q8IVU9 208 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 EMC1Q8N766 993 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 FAM156AQ8NDB6 213 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 COX4I2Q96KJ9 171 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 NYAP2Q9P242 653 aa15.82■□□□□ 0.12
LMNA-201ENST00000347559 HTR3EA5X5Y0 456 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 STX16-NPEPL1H3BU86 382 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 NEMP1O14524 444 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 FGF3P11487 239 aaPredicted RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 RFC1P35251 1148 aaPredicted RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 NUP107P57740 925 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 ROR1Q01973 937 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 KLF10Q13118 480 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 DMP1Q13316 513 aaPredicted RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 PIGHQ14442 188 aaPredicted RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 OLFML1Q6UWY5 402 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 SNX32Q86XE0 403 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 THAP11Q96EK4 314 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 BRD8Q9H0E9 1235 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 SPATA7Q9P0W8 599 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 EFR3BQ9Y2G0 817 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 RNF11Q9Y3C5 154 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 HMX2A2RU54 273 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 C3orf70A6NLC5 250 aaPredicted RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 CSDE1O75534 798 aaKnown RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 STAM2O75886 525 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 OSBPP22059 807 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 KDELR1P24390 212 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 CD151P48509 253 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 TMED10P49755 219 aaKnown RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 PRAMEP78395 509 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 MS4A2Q01362 244 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 MMRN1Q13201 1228 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 PDCD4Q53EL6 469 aaKnown RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 ALDH16A1Q8IZ83 802 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 MYO1HQ8N1T3 1032 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 ADAM32Q8TC27 787 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 SERPINI1Q99574 410 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 TMEM79Q9BSE2 394 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 P4HA1P13674 534 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 QARSP47897 775 aaKnown RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 UGCGQ16739 394 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 UNC5BQ8IZJ1 945 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 GCOM2Q9BZD3 368 aaPredicted RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 TRNAU1APQ9NX07 287 aaKnown RBP15.81■□□□□ 0.12
LMNA-201ENST00000347559 TCEAL9Q9UHQ7 104 aa15.81■□□□□ 0.12
LMNA-201ENST00000347559 FUOMA2VDF0 154 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 C1QAP02745 245 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 EIF2AK2P19525 551 aaKnown RBP15.8■□□□□ 0.12
LMNA-201ENST00000347559 PHKA2P46019 1235 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 XKR5Q6UX68 686 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 UNC5AQ6ZN44 842 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 MAP4K3Q8IVH8 894 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 VPS50Q96JG6 964 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 ACSS2Q9NR19 701 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 TSC22D4Q9Y3Q8 395 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 F5H423 210 aaPredicted RBP15.8■□□□□ 0.12
LMNA-201ENST00000347559 GNPATO15228 680 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 APOEP02649 317 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 CALB1P05937 261 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 ITGB5P18084 799 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 ARRB2P32121 409 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 FSCBQ5H9T9 825 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 SCARA3Q6AZY7 606 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 C16orf87Q6PH81 154 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 BNC2Q6ZN30 1099 aaPredicted RBP15.8■□□□□ 0.12
LMNA-201ENST00000347559 TTLL6Q8N841 843 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 POPDC2Q9HBU9 364 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 KCNH7Q9NS40 1196 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 POLLQ9UGP5 575 aa15.8■□□□□ 0.12
LMNA-201ENST00000347559 C7orf72A4D263 438 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 DDTLA6NHG4 134 aaPredicted RBP15.79■□□□□ 0.12
LMNA-201ENST00000347559 KCNN4O15554 427 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 ADAM23O75077 832 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 ZC3H11AO75152 810 aaKnown RBP eCLIP15.79■□□□□ 0.123e-13■□□□□ 9.7
LMNA-201ENST00000347559 HSPA13P48723 471 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 PFKPQ01813 784 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 KCNJ11Q14654 390 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 HADHQ16836 314 aaKnown RBP15.79■□□□□ 0.12
LMNA-201ENST00000347559 SLC9B1Q4ZJI4 515 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 JOSD2Q8TAC2 188 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 KBTBD7Q8WVZ9 684 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 BSNDQ8WZ55 320 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 RTKNQ9BST9 563 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 COG4Q9H9E3 785 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 TJP2Q9UDY2 1190 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 MYRFQ9Y2G1 1151 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 AFG3L2Q9Y4W6 797 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 PTPRJQ12913 1337 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 LRCH4O75427 683 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 H6PDO95479 791 aa15.79■□□□□ 0.12
LMNA-201ENST00000347559 ZBTB11O95625 1053 aaPredicted RBP15.79■□□□□ 0.12
LMNA-201ENST00000347559 AMHP03971 560 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms