RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 OTUD4Q01804 1114 aaKnown RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 IFRD2Q12894 506 aaPredicted RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 KRT81Q14533 505 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 ARTNQ5T4W7 220 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 SNX30Q5VWJ9 437 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 RFX6Q8HWS3 928 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 ACTL9Q8TC94 416 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 SPPL3Q8TCT6 385 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 FBXO32Q969P5 355 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 SLC39A13Q96H72 371 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 FAM118BQ9BPY3 351 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 LBHD1Q9BQE6 289 aaPredicted RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 TRIM51Q9BSJ1 452 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 OSBPL2Q9H1P3 480 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 SMOC2Q9H3U7 446 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 ARHGEF38Q9NXL2 777 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 COX16Q9P0S2 106 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 SAE1Q9UBE0 346 aaPredicted RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 UTP11Q9Y3A2 253 aaKnown RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 IRAK3Q9Y616 596 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 ESYT3A0FGR9 886 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 FAM72CH0Y354 149 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 DAPK3O43293 454 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 ERLIN1O75477 346 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 ITGAVP06756 1048 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 CNPP09543 421 aaKnown RBP11.39□□□□□ -0.59
ECM1-201ENST00000346569 RARGP13631 454 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 ECHS1P30084 290 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 VCPP55072 806 aaKnown RBP11.39□□□□□ -0.59
ECM1-201ENST00000346569 ERVFC1P60507 584 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 LMNB2Q03252 620 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 BYSLQ13895 437 aaKnown RBP11.39□□□□□ -0.59
ECM1-201ENST00000346569 KCTD19Q17RG1 926 aaPredicted RBP11.39□□□□□ -0.59
ECM1-201ENST00000346569 BRMS1LQ5PSV4 323 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 FAM72AQ5TYM5 149 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 FAM72DQ6L9T8 149 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 SND1Q7KZF4 910 aaKnown RBP eCLIP11.39□□□□□ -0.592e-8■■■■□ 21.2
ECM1-201ENST00000346569 FAM72BQ86X60 149 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 DDX42Q86XP3 938 aaKnown RBP eCLIP11.39□□□□□ -0.59
ECM1-201ENST00000346569 AENQ8WTP8 325 aaKnown RBP11.39□□□□□ -0.59
ECM1-201ENST00000346569 GRK7Q8WTQ7 553 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 RNF139Q8WU17 664 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.59
ECM1-201ENST00000346569 OVCA2Q8WZ82 227 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 MYRFLQ96LU7 910 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 HAPLN3Q96S86 360 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 CYP4F11Q9HBI6 524 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
ECM1-201ENST00000346569 FAM114A2Q9NRY5 505 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 ETNK2Q9NVF9 386 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 ZNF446Q9NWS9 450 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 NUDT5Q9UKK9 219 aa11.39□□□□□ -0.59
ECM1-201ENST00000346569 KCNU1A8MYU2 1149 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 C5orf67F2Z3F1 127 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 SEC31AO94979 1220 aaKnown RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 ARHGEF15O94989 841 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 ECEL1O95672 775 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 CSH1P0DML2 217 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 CSH2P0DML3 217 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 PECAM1P16284 738 aaPredicted RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 ZFXP17010 805 aaPredicted RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 GOT1P17174 413 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 TGM2P21980 687 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 AMPD1P23109 780 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 KLRC2P26717 231 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 ZNF135P52742 658 aaPredicted RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 DYNLT1P63172 113 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 CREMQ03060 361 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 SLC10A2Q12908 348 aaPredicted RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 NNTQ13423 1086 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 CUL1Q13616 776 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 PTK6Q13882 451 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 PPP2R5DQ14738 602 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 NOMO1Q15155 1222 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 ARL13BQ3SXY8 428 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 PPP6R3Q5H9R7 873 aaPredicted RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 EFHC2Q5JST6 749 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 C9orf50Q5SZB4 431 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 TMCO3Q6UWJ1 677 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 NPNTQ6UXI9 565 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 TMC7Q7Z402 723 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 ALLCQ8N6M5 410 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 IFT81Q8WYA0 676 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 KLHL5Q96PQ7 755 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 TKTL2Q9H0I9 626 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 FAM204AQ9H8W3 233 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 OLA1Q9NTK5 396 aaKnown RBP11.38□□□□□ -0.59
ECM1-201ENST00000346569 GRHL1Q9NZI5 618 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 RASAL2Q9UJF2 1139 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 NFU1Q9UMS0 254 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 NR2E3Q9Y5X4 410 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms