RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 MAP3K6O95382 1288 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 FDPSP14324 419 aaKnown RBP23.7■■□□□ 1.38
NPAS3-201ENST00000346562 HDDC2Q7Z4H3 204 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 SH3GL2Q99962 352 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 FBXO10Q9UK96 956 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 SESN1Q9Y6P5 492 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 EPS8L3Q8TE67 593 aaKnown RBP23.7■■□□□ 1.38
NPAS3-201ENST00000346562 ATP8B4Q8TF62 1192 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 FAM136AQ96C01 138 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 SERPINB11Q96P15 392 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 C10orf88Q9H8K7 445 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 FBXL21Q9UKT6 434 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 SNCAIPQ9Y6H5 919 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 CARNS1A5YM72 827 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 PDHXO00330 501 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 MAPTP10636 758 aaKnown RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 ACOX1Q15067 660 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 PPM1LQ5SGD2 360 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 SRLQ86TD4 932 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 GLMNQ92990 594 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 BARX2Q9UMQ3 279 aaPredicted RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 CYP7B1O75881 506 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 SLC2A4P14672 509 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 SKP1P63208 163 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 MRPS35P82673 323 aaKnown RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 PURAQ00577 322 aaKnown RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 BTG3Q14201 252 aaPredicted RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 USP7Q93009 1102 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 NEXMIFQ5QGS0 1516 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 PTPRUQ92729 1446 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 A0A0A6YYK5 440 aaPredicted RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 ZNF7P17097 686 aaPredicted RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 MGAT5Q09328 741 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 MFSD10Q14728 455 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 CBWD3Q5JTY5 395 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 CBWD5Q5RIA9 395 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 SOCS4Q8WXH5 440 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 ATXN3LQ9H3M9 355 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 SNX13Q9Y5W8 968 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 RGL2O15211 777 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 CPA3P15088 417 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 TAGLN3Q9UI15 199 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 STARD13Q9Y3M8 1113 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 H3BRB1 525 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 CXCL8P10145 99 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 KDM7AQ6ZMT4 941 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 TUT1Q9H6E5 874 aaKnown RBP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 ATP13A1Q9HD20 1204 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 SETD4Q9NVD3 440 aa23.69■■□□□ 1.38
NPAS3-201ENST00000346562 RBM22Q9NW64 420 aaKnown RBP eCLIP23.69■■□□□ 1.38
NPAS3-201ENST00000346562 ADGRA3Q8IWK6 1321 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 RAG1P15918 1043 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 GRTP1Q5TC63 336 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 C11orf63Q6NUN7 778 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 RD3Q7Z3Z2 195 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 CAMKK1Q8N5S9 505 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PRKD2Q9BZL6 878 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PDP2Q9P2J9 529 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 TDRKHQ9Y2W6 561 aaKnown RBP23.68■■□□□ 1.38
NPAS3-201ENST00000346562 POMCP01189 267 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 ARMCX4Q5H9R4 360 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PDPK2PQ6A1A2 396 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 APOL2Q9BQE5 337 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 TRIM8Q9BZR9 551 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PARVBQ9HBI1 364 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 VTA1Q9NP79 307 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 KRT75O95678 551 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 CDH17Q12864 832 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 NR6A1Q15406 480 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 DPY30Q9C005 99 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 SPATC1LQ9H0A9 340 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PQBP1O60828 265 aaKnown RBP23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PABPC1P11940 636 aaKnown RBP23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PSMC3P17980 439 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 TALDO1P37837 337 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 MYBPC2Q14324 1141 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 PRMT9Q6P2P2 845 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 LRRC34Q8IZ02 419 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 ST13P5Q8NFI4 369 aaPredicted RBP23.68■■□□□ 1.38
NPAS3-201ENST00000346562 ZMYM2Q9UBW7 1377 aa23.68■■□□□ 1.38
NPAS3-201ENST00000346562 TRIM66O15016 1216 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 FEN1P39748 380 aaKnown RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 CD151P48509 253 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 FNDC3BQ53EP0 1204 aaKnown RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 MCOLN3Q8TDD5 553 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 ADI1Q9BV57 179 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 SLC24A2Q9UI40 661 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 MAGEA13PA6NCF6 341 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 GRIK3Q13003 919 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 GNA13Q14344 377 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 SCUBE1Q8IWY4 988 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 POLLQ9UGP5 575 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 KIF1CO43896 1103 aaKnown RBP23.67■■□□□ 1.38
NPAS3-201ENST00000346562 TGFB3P10600 412 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 PGM5Q15124 567 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 PKN1Q16512 942 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 FBXW10Q5XX13 1052 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 FAM45BPQ6NSW5 357 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 RINLQ6ZS11 566 aa23.67■■□□□ 1.38
NPAS3-201ENST00000346562 POMGNT2Q8NAT1 580 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms