RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ADGRF1Q5T601 910 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 OR6B2Q6IFH4 312 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 ASCL5Q7RTU5 278 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 SLC47A2Q86VL8 602 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 WDR5BQ86VZ2 330 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 C12orf40Q86WS4 652 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 ZNF557Q8N988 423 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 CLEC4CQ8WTT0 213 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 IRX2Q9BZI1 471 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 POLMQ9NP87 494 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 GMEB2Q9UKD1 530 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 MMP17Q9ULZ9 603 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 F8VZ95 297 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 LILRB5O75023 590 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 KLF8O95600 359 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 KLKB1P03952 638 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 CCDC172P0C7W6 258 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 CYP11B1P15538 503 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 STAT1P42224 750 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 CDK17Q00537 523 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 ARID5AQ03989 594 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 SIM2Q14190 667 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 PKN3Q6P5Z2 889 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 PRR23BQ6ZRT6 265 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 ZNF677Q86XU0 584 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 ZNF513Q8N8E2 541 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 C1orf131Q8NDD1 294 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 RUBCNQ92622 972 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 TMA16Q96EY4 203 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 SLC2A11Q9BYW1 496 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 ASNSD1Q9NWL6 643 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 PLK2Q9NYY3 685 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 TLR6Q9Y2C9 796 aa16.43■□□□□ 0.22
TSPAN4-201ENST00000346501 LRRC10BA6NIK2 292 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 AXIN1O15169 862 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 IRAK2O43187 625 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 PAPSS1O43252 624 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 MSI1O43347 362 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 HSF2BPO75031 334 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 GABBR2O75899 941 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 LSM8O95777 96 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 PNMA6AP0CW24 399 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 SLC2A3P11169 496 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 TDGF1P13385 188 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 MTA1Q13330 715 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 CACNA2D4Q7Z3S7 1137 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 ERICH1Q86X53 443 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 CCDC33Q8N5R6 958 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 DQX1Q8TE96 717 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 RNF34Q969K3 372 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 AZIN2Q96A70 460 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 HHIPQ96QV1 700 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 NAA15Q9BXJ9 866 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 NLRC4Q9NPP4 1024 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 TMEM51Q9NW97 253 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 NAALADL1Q9UQQ1 740 aa16.42■□□□□ 0.22
TSPAN4-201ENST00000346501 ATG2BQ96BY7 2078 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 MYOFQ9NZM1 2061 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 NPC1O15118 1278 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 CAVIN2O95810 425 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 PENKP01210 267 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 ZNF18P17022 549 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 SOX5P35711 763 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 CRY1Q16526 586 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 DCAF6Q58WW2 860 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 TAF3Q5VWG9 929 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 CHPFQ8IZ52 775 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 ALLCQ8N6M5 410 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 GPR161Q8N6U8 529 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 ATP6V0D2Q8N8Y2 350 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 TXNDC5Q8NBS9 432 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 CPXM1Q96SM3 734 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 FAM204AQ9H8W3 233 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 RRN3Q9NYV6 651 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 BCCIPQ9P287 314 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
TSPAN4-201ENST00000346501 ACSL4O60488 711 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 RPP40O75818 363 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 GFPT2O94808 682 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 ABCB4P21439 1286 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 NTSR1P30989 418 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 KIR2DL1P43626 348 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 SLC6A3Q01959 620 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 BYSLQ13895 437 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 NCAPHQ15003 741 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 EIF4HQ15056 248 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 USP39Q53GS9 565 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 FYB2Q5VWT5 728 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 LAIR1Q6GTX8 287 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 SND1Q7KZF4 910 aaKnown RBP eCLIP16.4■□□□□ 0.225e-7■■■□□ 16.2
TSPAN4-201ENST00000346501 ANKS1BQ7Z6G8 1248 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 C11orf74Q86VG3 221 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 FAM217AQ8IXS0 508 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 PGBD3Q8N328 593 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms