RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KYNUQ16719 465 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 CNKSR3Q6P9H4 555 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 LRRC43Q8N309 656 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 RSAD2Q8WXG1 361 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 IRGQQ8WZA9 623 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 CPT1BQ92523 772 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 CASP10Q92851 521 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 PGAP3Q96FM1 320 aaPredicted RBP14.08□□□□□ -0.16
CDC42-202ENST00000344548 NCAPGQ9BPX3 1015 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 FAM204AQ9H8W3 233 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 ADAM21Q9UKJ8 722 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 A0A1W2PQH9 124 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 MTMR11A4FU01 709 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 C1QTNF8P60827 252 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 SEMA3BQ13214 749 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 DCP1BQ8IZD4 617 aaKnown RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 C9orf72Q96LT7 481 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 TKTL2Q9H0I9 626 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 TPX2Q9ULW0 747 aaKnown RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 C2CD2LO14523 706 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 KCNN4O15554 427 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 HOXA2O43364 376 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 MFSD11O43934 449 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 TMEM63AO94886 807 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 ACSL3O95573 720 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 IGLV3-25P01717 112 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 CPB1P15086 417 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 TGM2P21980 687 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 CXCR3P49682 368 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 CTCFP49711 727 aaPredicted RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 ROR1Q01973 937 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 DUSP4Q13115 394 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 ARTNQ5T4W7 220 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 ZNF280DQ6N043 979 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 KCNT2Q6UVM3 1135 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 VSIG1Q86XK7 387 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 SCML4Q8N228 414 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 PRCCQ92733 491 aaPredicted RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 TOP1MTQ969P6 601 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 RUFY1Q96T51 708 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 TMEM175Q9BSA9 504 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 MRPL9Q9BYD2 267 aaKnown RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 XPO7Q9UIA9 1087 aaKnown RBP14.07□□□□□ -0.16
CDC42-202ENST00000344548 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 CDY1Q9Y6F8 540 aa14.07□□□□□ -0.16
CDC42-202ENST00000344548 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 NFE2Q16621 373 aaPredicted RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 MSS51Q4VC12 460 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 FAXCQ5TGI0 409 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDC42-202ENST00000344548 LGMNQ99538 433 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 TTPALQ9BTX7 342 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 FRMD8P1Q9BZ68 369 aaPredicted RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 WDCPQ9H6R7 721 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 TMBIM4Q9HC24 238 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 MYO16Q9Y6X6 1858 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 ZNF487B1APH4 448 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 PARNO95453 639 aaKnown RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 TBX18O95935 607 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 VAV1P15498 845 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 GPR17Q13304 367 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 DPYSQ14117 519 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 DNAJC21Q5F1R6 531 aaKnown RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 LRIG3Q6UXM1 1119 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 RFX8Q6ZV50 586 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 NUP93Q8N1F7 819 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 NAT8LQ8N9F0 302 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 CCDC110Q8TBZ0 833 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 NTAN1Q96AB6 310 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDC42-202ENST00000344548 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 WDR83Q9BRX9 315 aaKnown RBP14.06□□□□□ -0.16
CDC42-202ENST00000344548 CENPHQ9H3R5 247 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 NINJ2Q9NZG7 142 aa14.06□□□□□ -0.16
CDC42-202ENST00000344548 DCLK1O15075 740 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 TIMP1P01033 207 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 NUDT17P0C025 328 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 ARL4AP40617 200 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 SCAPQ12770 1279 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 SLMAPQ14BN4 828 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 TERF2Q15554 542 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 MGAT5BQ3V5L5 792 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 EFHC2Q5JST6 749 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 FNBP1LQ5T0N5 605 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 VSTM1Q6UX27 236 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 RNF168Q8IYW5 571 aaPredicted RBP14.05□□□□□ -0.16
CDC42-202ENST00000344548 ZCCHC9Q8N567 271 aaKnown RBP14.05□□□□□ -0.16
CDC42-202ENST00000344548 NPWQ8N729 165 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 IGSF21Q96ID5 467 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 C8orf48Q96LL4 319 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 RC3H2Q9HBD1 1191 aaKnown RBP14.05□□□□□ -0.16
CDC42-202ENST00000344548 GMIPQ9P107 970 aa14.05□□□□□ -0.16
CDC42-202ENST00000344548 CDH23Q9H251 3354 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms