RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 PPP3CCP48454 512 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 EFEMP1Q12805 493 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 NAA30Q147X3 362 aaPredicted RBP16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 ERCC6LQ2NKX8 1250 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 ARL13BQ3SXY8 428 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 EFHC2Q5JST6 749 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 BRMS1LQ5PSV4 323 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 SLC22A17Q8WUG5 538 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 TSC1Q92574 1164 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 CDK5RAP1Q96SZ6 601 aaKnown RBP16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 TKTL2Q9H0I9 626 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 PLEKHA4Q9H4M7 779 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 ZNF334Q9HCZ1 680 aaPredicted RBP16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 ARHGEF38Q9NXL2 777 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 DENND4CQ5VZ89 1909 aa16.96■□□□□ 0.31
CEACAM1-202ENST00000344391 UQCRHLA0A096LP55 91 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 F11P03951 625 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 UQCRHP07919 91 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 MMRN1Q13201 1228 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 NNTQ13423 1086 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 PPP2R5DQ14738 602 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 CYP1B1Q16678 543 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 PPP6R3Q5H9R7 873 aaPredicted RBP16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 C10orf120Q5SQS8 335 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 TMEM150AQ86TG1 271 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 PYROXD2Q8N2H3 581 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 RNF34Q969K3 372 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 FAF2Q96CS3 445 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 SLC39A13Q96H72 371 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 RNF157Q96PX1 679 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 KRT12Q99456 494 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 ZNF670Q9BS34 389 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 LRRC3Q9BY71 257 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 DDX47Q9H0S4 455 aaKnown RBP16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 IL21Q9HBE4 155 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 TLR6Q9Y2C9 796 aa16.96■□□□□ 0.3
CEACAM1-202ENST00000344391 EPCAMP16422 314 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 CCR1P32246 355 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 RGS19P49795 217 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 ANKRD20A8PQ5CZ79 823 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 PPM1LQ5SGD2 360 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 HECTD3Q5T447 861 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 BBS12Q6ZW61 710 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 TADA2BQ86TJ2 420 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 KLHL7Q8IXQ5 586 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 C12orf50Q8NA57 414 aaPredicted RBP16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 HDAC7Q8WUI4 952 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 MAN1C1Q9NR34 630 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 MARCH2Q9P0N8 246 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 RCOR3Q9P2K3 495 aaPredicted RBP16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 RASAL2Q9UJF2 1139 aa16.95■□□□□ 0.3
CEACAM1-202ENST00000344391 MYO9BQ13459 2157 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 EPOPA6NHQ4 379 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 KCNU1A8MYU2 1149 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 PER2O15055 1255 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 CST8O60676 142 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 PHF2O75151 1096 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 ZMYND10O75800 440 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 ATP5C1P36542 298 aaKnown RBP16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 TUBP50607 506 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 TBX4P57082 545 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 TRIP4Q15650 581 aaPredicted RBP16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 KLHDC10Q6PID8 442 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 MIB1Q86YT6 1006 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 RFX6Q8HWS3 928 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 TMC8Q8IU68 726 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 ELMOD1Q8N336 334 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 PCDH19Q8TAB3 1148 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 FCRL2Q96LA5 508 aaPredicted RBP16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 MAK16Q9BXY0 300 aaKnown RBP16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 LRRC19Q9H756 370 aa16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 R3HDM2Q9Y2K5 976 aaKnown RBP16.94■□□□□ 0.3
CEACAM1-202ENST00000344391 DOCK6Q96HP0 2047 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 SLC2A3P11169 496 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 CHRNA3P32297 505 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 SEMA3BQ13214 749 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 TFDP2Q14188 446 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 PABPC1LQ4VXU2 614 aaKnown RBP16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 ADGRD2Q7Z7M1 963 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 PQLC3Q8N755 202 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 C1orf54Q8WWF1 131 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 MAGOHBQ96A72 148 aaKnown RBP16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 CSPG4P5Q96PW8 444 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 HAPLN3Q96S86 360 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 LRRC1Q9BTT6 524 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 OSBPL2Q9H1P3 480 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 PRO3102Q9H379 93 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 SLITRK6Q9H5Y7 841 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 HOMER3Q9NSC5 361 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 DNMT3LQ9UJW3 386 aa16.93■□□□□ 0.3
CEACAM1-202ENST00000344391 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 FAM72CH0Y354 149 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 CCL16O15467 120 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 COCHO43405 550 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 RFPL2O75678 378 aa16.92■□□□□ 0.3
CEACAM1-202ENST00000344391 OAS1P00973 400 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms