RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 FAM217AQ8IXS0 508 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 FAM160A2Q8N612 972 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-201ENST00000344376 LSM14BQ9BX40 385 aaKnown RBP16.76■□□□□ 0.27
ATG4B-201ENST00000344376 BCCIPQ9P287 314 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATG4B-201ENST00000344376 USP18Q9UMW8 372 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 PCDHGC3Q9UN70 934 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 OTOGLQ3ZCN5 2332 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 ANTXRLA6NF34 631 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 E5RJQ4 531 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 FOXN3O00409 490 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-201ENST00000344376 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-201ENST00000344376 LRP3O75074 770 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 SLC11A2P49281 568 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 TBX4P57082 545 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 E2F5Q15329 346 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 TOGARAM2Q6ZUX3 1019 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 BEND5Q7L4P6 421 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 TMEM110Q86TL2 294 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 RASSF3Q86WH2 238 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 CHPFQ8IZ52 775 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 ZDHHC4Q9NPG8 344 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 STOML2Q9UJZ1 356 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 FBXO10Q9UK96 956 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 AJAP1Q9UKB5 411 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-201ENST00000344376 SLC27A6Q9Y2P4 619 aa16.75■□□□□ 0.27
ATG4B-201ENST00000344376 EP300Q09472 2414 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-201ENST00000344376 GPR179Q6PRD1 2367 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 PAPSS1O43252 624 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-201ENST00000344376 CISD3P0C7P0 127 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 CHRM1P11229 460 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-201ENST00000344376 NTSR1P30989 418 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 MYL5Q02045 173 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 RING1Q06587 406 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 NNTQ13423 1086 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 DRAP1Q14919 205 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-201ENST00000344376 ELF2Q15723 593 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 FKBP15Q5T1M5 1219 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 ADGRF1Q5T601 910 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 EGFLAMQ63HQ2 1017 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 TMEM92Q6UXU6 159 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 ANKS1BQ7Z6G8 1248 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 PASD1Q8IV76 773 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 FAM71AQ8IYT1 594 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 DQX1Q8TE96 717 aaKnown RBP16.74■□□□□ 0.27
ATG4B-201ENST00000344376 IPO4Q8TEX9 1081 aaKnown RBP16.74■□□□□ 0.27
ATG4B-201ENST00000344376 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 LOXL4Q96JB6 756 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 PPP1R13BQ96KQ4 1090 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 SLC2A11Q9BYW1 496 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 TPSD1Q9BZJ3 242 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 LHX5Q9H2C1 402 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 POPDC2Q9HBU9 364 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 CYTH4Q9UIA0 394 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 MYOFQ9NZM1 2061 aa16.74■□□□□ 0.27
ATG4B-201ENST00000344376 ATG2BQ96BY7 2078 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 TCRBV21S2A2A0A5A6 115 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 ADAM23O75077 832 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 IGLV3-27P01718 113 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 HOXB2P14652 356 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 YWHAZP63104 245 aaKnown RBP16.73■□□□□ 0.27
ATG4B-201ENST00000344376 KCNMA1Q12791 1236 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 KRT31Q15323 416 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 C11orf57Q6ZUT1 292 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-201ENST00000344376 KBTBD6Q86V97 674 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 SLC47A2Q86VL8 602 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 PGBD3Q8N328 593 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 MDGA1Q8NFP4 955 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 TMA16Q96EY4 203 aaKnown RBP16.73■□□□□ 0.27
ATG4B-201ENST00000344376 SPACA7Q96KW9 195 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 DDX50Q9BQ39 737 aaKnown RBP16.73■□□□□ 0.27
ATG4B-201ENST00000344376 IRX2Q9BZI1 471 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-201ENST00000344376 VPS16Q9H269 839 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 SYNCQ9H7C4 482 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 NAALADL1Q9UQQ1 740 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 TLR6Q9Y2C9 796 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 FHOD1Q9Y613 1164 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 ZNF292O60281 2723 aa16.73■□□□□ 0.27
ATG4B-201ENST00000344376 TYW5A2RUC4 315 aaKnown RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 PRRT4C9JH25 899 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 TSPAN3O60637 253 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 RHOBTB1O94844 696 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 UCHL3P15374 230 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 GBP1P32455 592 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 CLCN1P35523 988 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 LMNB2Q03252 620 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 SPEM2Q0P670 501 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 HMGB4Q8WW32 186 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 AZIN2Q96A70 460 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 NAT10Q9H0A0 1025 aaKnown RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 PLCB1Q9NQ66 1216 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 GFRA2O00451 464 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 NPC1O15118 1278 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 IRAK2O43187 625 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 ACSL4O60488 711 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms