RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TMEM191CA6NGB0 347 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 KRIT1O00522 736 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PODXLO00592 558 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ZNF197O14709 1029 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ATP8B1O43520 1251 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CHRNB1P11230 501 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ATF2P15336 505 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PSMC3P17980 439 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 TNFRSF8P28908 595 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 MARCKSL1P49006 195 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 SNX16P57768 344 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 GAS6Q14393 721 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PIGHQ14442 188 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CSRP2Q16527 193 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 LONRF2Q1L5Z9 754 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PPP1R26Q5T8A7 1209 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CYP4A22Q5TCH4 519 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CC2D1AQ6P1N0 951 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 DCUN1D2Q6PH85 259 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PRR23CQ6ZRP0 262 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PHLDB2Q86SQ0 1253 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ACOT1Q86TX2 421 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 XYLT1Q86Y38 959 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 RHOT1Q8IXI2 618 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CRYBG2Q8N1P7 616 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 TMEM86AQ8N2M4 240 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 FNIP1Q8TF40 1166 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 TNIP3Q96KP6 325 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 MCEEQ96PE7 176 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CPXM1Q96SM3 734 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CORO1BQ9BR76 489 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 LRRC1Q9BTT6 524 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 STIM2Q9P246 746 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 HESX1Q9UBX0 185 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PIAS3Q9Y6X2 628 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 SIGLEC16A6NMB1 481 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 I3L4J1 428 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 MOSPD3O75425 235 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PAPSS2O95340 614 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 SEC24AO95486 1093 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ERBB2P04626 1255 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ELF1P32519 619 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 GNL1P36915 607 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CXCL12P48061 93 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 BCAT1P54687 386 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PSMC1P62191 440 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 SATB1Q01826 763 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 ZNF211Q13398 564 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PKDCCQ504Y2 493 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PRR23BQ6ZRT6 265 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 PDZD4Q76G19 769 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CPNE8Q86YQ8 564 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 SPATA18Q8TC71 538 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 MAIP1Q8WWC4 291 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 SMARCD2Q92925 531 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 KRT12Q99456 494 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 TRPV4Q9HBA0 871 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 CYLDQ9NQC7 956 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 NME7Q9Y5B8 376 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 INSL5Q9Y5Q6 135 aa14.09□□□□□ -0.15
HERPUD1-202ENST00000344114 USP24Q9UPU5 2620 aa14.08□□□□□ -0.15
HERPUD1-202ENST00000344114 ARNTLO00327 626 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 CYB561D2O14569 222 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 PRRG1O14668 218 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 SYN3O14994 580 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 HRO43593 1189 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 GDI1P31150 447 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 CNR2P34972 360 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 EPHA5P54756 1037 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 RPL7AP62424 266 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 ZNF252P-AS1Q0IIN9 211 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 BST2Q10589 180 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 SIM2Q14190 667 aaPredicted RBP14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 MRPL58Q14197 206 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 LRRC38Q5VT99 294 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 KATNAL2Q8IYT4 538 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 SPEM1Q8N4L4 309 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 CCDC26Q8TAB7 109 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 STK32AQ8WU08 396 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 ZSWIM3Q96MP5 696 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 CYP4F11Q9HBI6 524 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 FAM49BQ9NUQ9 324 aa14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.16
HERPUD1-202ENST00000344114 NUP210Q8TEM1 1887 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 GOLGA8SH3BPF8 625 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 K7ESF4 209 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 GDF9O60383 454 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 FOXD2O60548 495 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 PHF2O75151 1096 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 HEXIM1O94992 359 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 ZRANB2O95218 330 aaKnown RBP eCLIP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 GJB6O95452 261 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 PYGMP11217 842 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 KRT3P12035 628 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 AARSP49588 968 aaKnown RBP eCLIP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 DMWDQ09019 674 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 ACAP1Q15027 740 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms