RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 SERPINB11Q96P15 392 aa19.53■□□□□ 0.72
CDHR4-201ENST00000343366 SLC2A13Q96QE2 648 aa19.53■□□□□ 0.72
CDHR4-201ENST00000343366 EPC1Q9H2F5 836 aa19.53■□□□□ 0.72
CDHR4-201ENST00000343366 LCMT1Q9UIC8 334 aa19.53■□□□□ 0.72
CDHR4-201ENST00000343366 MTF2Q9Y483 593 aaPredicted RBP19.53■□□□□ 0.72
CDHR4-201ENST00000343366 PCDHGA2Q9Y5H1 932 aa19.53■□□□□ 0.72
CDHR4-201ENST00000343366 TMCO5BA8MYB1 307 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 EIF3CLB5ME19 914 aaKnown RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 ECI2O75521 394 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 LCA5LO95447 670 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 MBL2P11226 248 aaPredicted RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 MATKP42679 507 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 GFPT1Q06210 699 aaPredicted RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 DNAJC24Q6P3W2 148 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 ARL14EPQ8N8R7 260 aaPredicted RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 ST13P5Q8NFI4 369 aaPredicted RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 DEPDC1BQ8WUY9 529 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 EIF3CQ99613 913 aaKnown RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 CCSER2Q9H7U1 834 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 OSER1Q9NX31 292 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 TAS2R14Q9NYV8 317 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 TJP2Q9UDY2 1190 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 HBS1LQ9Y450 684 aaKnown RBP19.52■□□□□ 0.72
CDHR4-201ENST00000343366 PAXBP1Q9Y5B6 917 aa19.52■□□□□ 0.72
CDHR4-201ENST00000343366 COL4A2P08572 1712 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 SHISA7A6NL88 538 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 F9P00740 461 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 H2AFZP0C0S5 128 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 PRKCQQ04759 706 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 FAM78AQ5JUQ0 283 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 STXBP5Q5T5C0 1151 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 PLEKHA7Q6IQ23 1121 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 H2AFVQ71UI9 128 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 GPR161Q8N6U8 529 aaKnown RBP19.51■□□□□ 0.71
CDHR4-201ENST00000343366 CTNNBL1Q8WYA6 563 aaPredicted RBP19.51■□□□□ 0.71
CDHR4-201ENST00000343366 ZNF653Q96CK0 615 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 SHDQ96IW2 340 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 PDLIM2Q96JY6 352 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 DCLK3Q9C098 648 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 THG1LQ9NWX6 298 aaKnown RBP19.51■□□□□ 0.71
CDHR4-201ENST00000343366 MARCH2Q9P0N8 246 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 TMEM59LQ9UK28 342 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 NENFQ9UMX5 172 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 ZNF510Q9Y2H8 683 aa19.51■□□□□ 0.71
CDHR4-201ENST00000343366 EPN1Q9Y6I3 576 aaPredicted RBP19.51■□□□□ 0.71
CDHR4-201ENST00000343366 GOLGA8SH3BPF8 625 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 NDUFA10O95299 355 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 SLC2A3P11169 496 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 SDHBP21912 280 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 KRT83P78385 493 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 RING1Q06587 406 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 FZD5Q13467 585 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 MLF2Q15773 248 aaPredicted RBP19.5■□□□□ 0.71
CDHR4-201ENST00000343366 DCAF6Q58WW2 860 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 DCUN1D2Q6PH85 259 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 LRRC8AQ8IWT6 810 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 NDRG1Q92597 394 aaKnown RBP19.5■□□□□ 0.71
CDHR4-201ENST00000343366 EDEM1Q92611 657 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 CLDN23Q96B33 292 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 PLD4Q96BZ4 506 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 PGAP3Q96FM1 320 aaPredicted RBP19.5■□□□□ 0.71
CDHR4-201ENST00000343366 CALR3Q96L12 384 aaKnown RBP19.5■□□□□ 0.71
CDHR4-201ENST00000343366 ZSWIM3Q96MP5 696 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 NCAPGQ9BPX3 1015 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 RNF38Q9H0F5 515 aa19.5■□□□□ 0.71
CDHR4-201ENST00000343366 CNOT8Q9UFF9 292 aaKnown RBP19.5■□□□□ 0.71
CDHR4-201ENST00000343366 LSM7Q9UK45 103 aaKnown RBP19.5■□□□□ 0.71
CDHR4-201ENST00000343366 F5P12259 2224 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 SLC9A3R1O14745 358 aaPredicted RBP19.49■□□□□ 0.71
CDHR4-201ENST00000343366 ARHGAP6O43182 974 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 TMEM253P0C7T8 217 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 RRM1P23921 792 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 CCDC173Q0VFZ6 552 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 EFEMP1Q12805 493 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 SLC25A52Q3SY17 297 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 ACBD5Q5T8D3 534 aaPredicted RBP19.49■□□□□ 0.71
CDHR4-201ENST00000343366 SND1Q7KZF4 910 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDHR4-201ENST00000343366 MFSD6LQ8IWD5 586 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 UNC45BQ8IWX7 931 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 DEFB106AQ8N104 65 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 FNIP1Q8TF40 1166 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 USP13Q92995 863 aaPredicted RBP19.49■□□□□ 0.71
CDHR4-201ENST00000343366 OTUB2Q96DC9 234 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 CYP2S1Q96SQ9 504 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 LTB4R2Q9NPC1 389 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 PRMT8Q9NR22 394 aaPredicted RBP19.49■□□□□ 0.71
CDHR4-201ENST00000343366 METTL5Q9NRN9 209 aaKnown RBP19.49■□□□□ 0.71
CDHR4-201ENST00000343366 TBC1D14Q9P2M4 693 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 UVRAGQ9P2Y5 699 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 RASAL2Q9UJF2 1139 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 TLR6Q9Y2C9 796 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 CPQQ9Y646 472 aa19.49■□□□□ 0.71
CDHR4-201ENST00000343366 FRYQ5TBA9 3013 aa19.48■□□□□ 0.71
CDHR4-201ENST00000343366 TCRBV5S1A1TA0A578 114 aa19.48■□□□□ 0.71
CDHR4-201ENST00000343366 E2F8A0AVK6 867 aa19.48■□□□□ 0.71
CDHR4-201ENST00000343366 LAMTOR5O43504 91 aa19.48■□□□□ 0.71
CDHR4-201ENST00000343366 CYP1A2P05177 515 aa19.48■□□□□ 0.71
CDHR4-201ENST00000343366 FYNP06241 537 aa19.48■□□□□ 0.71
CDHR4-201ENST00000343366 PTMAP06454 111 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms