RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MTA2O94776 668 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 TRUB2O95900 331 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 C4BPAP04003 597 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 PTPN7P35236 360 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 BTKQ06187 659 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 XRCC4Q13426 336 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 POU6F1Q14863 301 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 BNC2Q6ZN30 1099 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 OTOAQ7RTW8 1153 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SIAH1Q8IUQ4 282 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 DNAJB3Q8WWF6 145 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 OPTNQ96CV9 577 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 UNKQ9C0B0 810 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 TTC36A6NLP5 189 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 STRNO43815 780 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 LRCH4O75427 683 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 TFE3P19532 575 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 HOXD13P35453 343 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CPT1AP50416 773 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 IRX1P78414 480 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 FOXD4Q12950 439 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 MGAT5BQ3V5L5 792 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ZDHHC24Q6UX98 284 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ANGPTL8Q6UXH0 198 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 UNC93AQ86WB7 457 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 PIWIL2Q8TC59 973 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 BLOC1S5Q8TDH9 187 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 CPXM1Q96SM3 734 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ABHD16BQ9H3Z7 469 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 PRDM12Q9H4Q4 367 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 KCNK4Q9NYG8 393 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 DCXO43602 365 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CRADDP78560 199 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 LAMB3Q13751 1172 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 C10orf120Q5SQS8 335 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 PDPK2PQ6A1A2 396 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 MON1BQ7L1V2 547 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 PIGZQ86VD9 579 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 HIC2Q96JB3 615 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SEPT5Q99719 369 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 FICDQ9BVA6 458 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 DHX33Q9H6R0 707 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 VTA1Q9NP79 307 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 AFF4Q9UHB7 1163 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 TMEM59LQ9UK28 342 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SNX5Q9Y5X3 404 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 GRIN2DO15399 1336 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 MYPNQ86TC9 1320 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 A0A0A0MRY4 1105 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 GOLGA8TH3BQL2 631 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 VAPBO95292 243 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SLC2A3P11169 496 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ODC1P11926 461 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 PGAM1P18669 254 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ADORA2AP29274 412 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SLC1A6P48664 564 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 LHX1P48742 406 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CSHL1Q14406 222 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 CAPRIN1Q14444 709 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 ZC3H12AQ5D1E8 599 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 FAM183BPQ6ZVS7 135 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ZNF398Q8TD17 642 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 TUBGCP3Q96CW5 907 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 HSFY1Q96LI6 401 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 SPATA13Q96N96 652 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ZDHHC18Q9NUE0 388 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 GEMIN8Q9NWZ8 242 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 EFR3BQ9Y2G0 817 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 RPTORQ8N122 1335 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 C2CD2LO14523 706 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 AVILO75366 819 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 HMOX2P30519 316 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 ARHGDIAP52565 204 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 HIRAP54198 1017 aaPredicted RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 LBRQ14739 615 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 MRNIPQ6NTE8 343 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 KYAT3Q6YP21 454 aaKnown RBP7.39□□□□□ -1.23
VCAN-202ENST00000342785 FAM136AQ96C01 138 aa7.39□□□□□ -1.23
VCAN-202ENST00000342785 MAGEB16A2A368 324 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 TOMM70O94826 608 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 DDHD2O94830 711 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 TSHRP16473 764 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 TBL3Q12788 808 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 PTP4A2Q12974 167 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 FITM2Q8N6M3 262 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 RNF148Q8N7C7 305 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 C12orf29Q8N999 325 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 SPOCK2Q92563 424 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 TRIM54Q9BYV2 358 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 ULBP1Q9BZM6 244 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 ATXN3LQ9H3M9 355 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 NRDE2Q9H7Z3 1164 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 GPAMQ9HCL2 828 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 SLCO1B7G3V0H7 640 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms