RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 GKN1Q9NS71 199 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 SMPD4Q9NXE4 827 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 FZD10Q9ULW2 581 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 A0A1W2PRU2 124 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 KRIT1O00522 736 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 COCHO43405 550 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 ENDOD1O94919 500 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 GOT1P17174 413 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 L1CAMP32004 1257 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 ARSEP51690 589 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 KCNQ1P51787 676 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 EIF4EBP2Q13542 120 aaPredicted RBP14.43□□□□□ -0.1
PMS1-201ENST00000342075 SNX1Q13596 522 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 ACAP1Q15027 740 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 ERMARDQ5T6L9 678 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 POLNQ7Z5Q5 900 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 TMC8Q8IU68 726 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 SIK2Q9H0K1 926 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 DENND4CQ5VZ89 1909 aa14.43□□□□□ -0.1
PMS1-201ENST00000342075 C2orf16Q68DN1 1984 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 NUP205Q92621 2012 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 CTAGE15A4D2H0 777 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 LINC01565O15544 149 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 CREB3O43889 395 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 KRT7P08729 469 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 CTAGE8P0CG41 777 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 MYL4P12829 197 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 GABRR2P28476 465 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 BMP8BP34820 402 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 ZXDBP98169 803 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 PPM1LQ5SGD2 360 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 LRRC38Q5VT99 294 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 CTAGE6Q86UF2 777 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 CTAGE4Q8IX94 777 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 CMASQ8NFW8 434 aaPredicted RBP14.42□□□□□ -0.1
PMS1-201ENST00000342075 HDAC7Q8WUI4 952 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 FAM161BQ96MY7 647 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 WDCPQ9H6R7 721 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 ETNK2Q9NVF9 386 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 hCG_1818297A0A087WSY0 165 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 RHOXF2BP0C7M4 288 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 PAFAH1B1P43034 410 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 KCNJ1P48048 391 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 KRT81Q14533 505 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 SLC5A9Q2M3M2 681 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 ODF2Q5BJF6 829 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 POTEHQ6S545 545 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 KRT12Q99456 494 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 RHOXF2Q9BQY4 288 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 LRRC3Q9BY71 257 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 TLE6Q9H808 572 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 MARCH2Q9P0N8 246 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 STK39Q9UEW8 545 aa14.42□□□□□ -0.1
PMS1-201ENST00000342075 SLC12A8A0AV02 714 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 ZMYND10O75800 440 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 F11P03951 625 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 IRF1P10914 325 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 ADRA1BP35368 520 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 CXCR3P49682 368 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 SLC7A5Q01650 507 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 PRUNE1Q86TP1 453 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 TP53INP2Q8IXH6 220 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 GPR65Q8IYL9 337 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 PRELID2Q8N945 189 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 MYRFLQ96LU7 910 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 CWC15Q9P013 229 aaKnown RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 COLQQ9Y215 455 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 PECAM1P16284 738 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 KLF1Q13351 362 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 TMC5Q6UXY8 1006 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 MYEOVQ96EZ4 313 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 DNMT3BQ9UBC3 853 aaKnown RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 IRAK1P51617 712 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 TFDP3Q5H9I0 405 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 RCOR2Q8IZ40 523 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 ARL14EPQ8N8R7 260 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 MAB21L3Q8N8X9 362 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 PCDH19Q8TAB3 1148 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 PGAP3Q96FM1 320 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 FCRL2Q96LA5 508 aaPredicted RBP14.41□□□□□ -0.1
PMS1-201ENST00000342075 SAMD11Q96NU1 681 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 NACA2Q9H009 215 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 PRDM12Q9H4Q4 367 aa14.41□□□□□ -0.1
PMS1-201ENST00000342075 CST8O60676 142 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 SRGAP2BP0DMP2 458 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 NRLP54845 237 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 ELF2Q15723 593 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 RFX6Q8HWS3 928 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 CEP112Q8N8E3 955 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 ING5Q8WYH8 240 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 LRRC1Q9BTT6 524 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 DDX56Q9NY93 547 aaKnown RBP14.4□□□□□ -0.1
PMS1-201ENST00000342075 CLIC5Q9NZA1 410 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 TRPM5Q9NZQ8 1165 aa14.4□□□□□ -0.1
PMS1-201ENST00000342075 CCDC195A0A1B0GUA6 201 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms