RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 MPLP40238 635 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 P2RY2P41231 377 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 EXOC3L4Q17RC7 722 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 AASDHQ4L235 1098 aaPredicted RBP21.04■□□□□ 0.96
SYNE2-201ENST00000341472 MPPE1Q53F39 396 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 PLA2G2CQ5R387 149 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 MSANTD2Q6P1R3 559 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 DENND1BQ6P3S1 775 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 GJB7Q6PEY0 223 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 TRIM65Q6PJ69 517 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 SCUBE3Q8IX30 993 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 FAM217AQ8IXS0 508 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 STK32AQ8WU08 396 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 ZNF606Q8WXB4 792 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 SLC2A11Q9BYW1 496 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 THAP9Q9H5L6 903 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 ST7Q9NRC1 585 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 CACNA1AO00555 2505 aa21.04■□□□□ 0.96
SYNE2-201ENST00000341472 HELZP42694 1942 aaKnown RBP21.04■□□□□ 0.96
SYNE2-201ENST00000341472 DMXL1Q9Y485 3027 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 A0A1W2PQF6 199 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 BCLAF3A2AJT9 711 aaKnown RBP21.03■□□□□ 0.96
SYNE2-201ENST00000341472 GTPBP10A4D1E9 387 aaKnown RBP21.03■□□□□ 0.96
SYNE2-201ENST00000341472 GFRA2O00451 464 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 SLC30A4O14863 429 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 GDF9O60383 454 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 CAVIN2O95810 425 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 LTFP02788 710 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 ERCC5P28715 1186 aaPredicted RBP21.03■□□□□ 0.96
SYNE2-201ENST00000341472 USP8P40818 1118 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 ACADSBP45954 432 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 ARHGAP44Q17R89 818 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 MAP7D1Q3KQU3 841 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 ADGRF1Q5T601 910 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 PMS2CLQ68D20 193 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 FAM114A1Q8IWE2 563 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 IPO4Q8TEX9 1081 aaKnown RBP21.03■□□□□ 0.96
SYNE2-201ENST00000341472 TMA16Q96EY4 203 aaKnown RBP21.03■□□□□ 0.96
SYNE2-201ENST00000341472 SPACA7Q96KW9 195 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 GABRG3Q99928 467 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 NUP62CLQ9H1M0 184 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 DACH1Q9UI36 760 aa21.03■□□□□ 0.96
SYNE2-201ENST00000341472 MYOFQ9NZM1 2061 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 DCDC2BA2VCK2 349 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 SART1O43290 800 aaKnown RBP21.02■□□□□ 0.96
SYNE2-201ENST00000341472 MSI1O43347 362 aaKnown RBP21.02■□□□□ 0.96
SYNE2-201ENST00000341472 THAP12O43422 761 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 TIMM44O43615 452 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 TSPAN3O60637 253 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 LATS1O95835 1130 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 PON1P27169 355 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 RPL34P49207 117 aaKnown RBP21.02■□□□□ 0.96
SYNE2-201ENST00000341472 ZNF445P59923 1031 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 E2F5Q15329 346 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 GEN1Q17RS7 908 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 CLEC17AQ6ZS10 378 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 LPCAT2Q7L5N7 544 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 UNC45BQ8IWX7 931 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 CLEC4CQ8WTT0 213 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 UCMAQ8WVF2 138 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 SMOC1Q9H4F8 434 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 CACNA2D2Q9NY47 1150 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 APEX2Q9UBZ4 518 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 STOML2Q9UJZ1 356 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 MYH10P35580 1976 aa21.02■□□□□ 0.96
SYNE2-201ENST00000341472 NPC1O15118 1278 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 NCAM1P13591 858 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 GABRG2P18507 467 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 GNA15P30679 374 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 DHPSP49366 369 aaPredicted RBP21.01■□□□□ 0.95
SYNE2-201ENST00000341472 MEA1Q16626 185 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 MAN2A1Q16706 1144 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 DPCR1Q3MIW9 517 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 FRMD1Q8N878 549 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 PIWIL1Q96J94 861 aaKnown RBP21.01■□□□□ 0.95
SYNE2-201ENST00000341472 SLC4A5Q9BY07 1137 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 ACP6Q9NPH0 428 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 ELOVL2Q9NXB9 296 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 CLEC4EQ9ULY5 219 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 STON1Q9Y6Q2 735 aa21.01■□□□□ 0.95
SYNE2-201ENST00000341472 WASH3PC4AMC7 463 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 SLC11A2P49281 568 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 TBX4P57082 545 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 APBA1Q02410 837 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 NUGGCQ68CJ6 796 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 SMYD5Q6GMV2 418 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 KIAA1211LQ6NV74 962 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 ANKS1BQ7Z6G8 1248 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 TMEM110Q86TL2 294 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 AZIN2Q96A70 460 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 FAM149B1Q96BN6 582 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 LMBRD1Q9NUN5 540 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 THAP10Q9P2Z0 257 aaPredicted RBP21■□□□□ 0.95
SYNE2-201ENST00000341472 MBD1Q9UIS9 605 aaPredicted RBP21■□□□□ 0.95
SYNE2-201ENST00000341472 RAD54BQ9Y620 910 aa21■□□□□ 0.95
SYNE2-201ENST00000341472 DCHS1Q96JQ0 3298 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 BECN2A8MW95 431 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 FYNP06241 537 aa20.99■□□□□ 0.95
SYNE2-201ENST00000341472 RING1Q06587 406 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms