RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TRIM7Q9C029 511 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 ECT2Q9H8V3 914 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 CNOT8Q9UFF9 292 aaKnown RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 AGO1Q9UL18 857 aaKnown RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SNX10Q9Y5X0 201 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SOBPA7XYQ1 873 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 NEDD8-MDP1E9PL57 170 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 GREM1O60565 184 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 HARS2P49590 506 aaKnown RBP13.75□□□□□ -0.21
TUBD1-202ENST00000340993 KDSRQ06136 332 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
TUBD1-202ENST00000340993 PON2Q15165 354 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 ITPRIPL2Q3MIP1 535 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-202ENST00000340993 DAB2IPQ5VWQ8 1189 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 MSANTD2Q6P1R3 559 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
TUBD1-202ENST00000340993 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 TMEM25Q86YD3 366 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 ATP2A3Q93084 1043 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 BTBD6Q96KE9 485 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 CCDC42Q96M95 316 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 SERPINB11Q96P15 392 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 TBC1D17Q9HA65 648 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 SLC2A4RGQ9NR83 387 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 PIGVQ9NUD9 493 aa13.75□□□□□ -0.21
TUBD1-202ENST00000340993 MTF2Q9Y483 593 aaPredicted RBP13.75□□□□□ -0.21
TUBD1-202ENST00000340993 BZW2Q9Y6E2 419 aaKnown RBP13.75□□□□□ -0.21
TUBD1-202ENST00000340993 E2F8A0AVK6 867 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 SOWAHDA6NJG2 315 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 TRIM24O15164 1050 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 IRAK2O43187 625 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 RTN2O75298 545 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 RFC1P35251 1148 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-202ENST00000340993 MATKP42679 507 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 SGSHP51688 502 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 PFKPQ01813 784 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 DHCR24Q15392 516 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-202ENST00000340993 C12orf40Q86WS4 652 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 FAM131BQ86XD5 332 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 ZDHHC17Q8IUH5 632 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 CPA6Q8N4T0 437 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 PLD4Q96BZ4 506 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 CHFRQ96EP1 664 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 FCRL2Q96LA5 508 aaPredicted RBP13.74□□□□□ -0.21
TUBD1-202ENST00000340993 TMEM59LQ9UK28 342 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 TFR2Q9UP52 801 aa13.74□□□□□ -0.21
TUBD1-202ENST00000340993 MYO18AQ92614 2054 aaKnown RBP13.74□□□□□ -0.21
TUBD1-202ENST00000340993 ANTXRLA6NF34 631 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 NFATC1O95644 943 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 ADH5P11766 374 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
TUBD1-202ENST00000340993 GJA4P35212 333 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 NOS2P35228 1153 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SLC6A11P48066 632 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 PDGFRLQ15198 375 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 RHBDF2Q6PJF5 856 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 HTR3DQ70Z44 454 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SFTPA1Q8IWL2 248 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 ADGRG2Q8IZP9 1017 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 PBXIP1Q96AQ6 731 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 ERLEC1Q96DZ1 483 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 MYEOVQ96EZ4 313 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 BBS2Q9BXC9 721 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SIK2Q9H0K1 926 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 RBM12Q9NTZ6 932 aaKnown RBP13.73□□□□□ -0.21
TUBD1-202ENST00000340993 ASNSD1Q9NWL6 643 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 STIM2Q9P246 746 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 HBS1LQ9Y450 684 aaKnown RBP13.73□□□□□ -0.21
TUBD1-202ENST00000340993 APOEP02649 317 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 DCNP07585 359 aaKnown RBP13.73□□□□□ -0.21
TUBD1-202ENST00000340993 GLI1P08151 1106 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SDC4P31431 198 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 HNRNPH3P31942 346 aaKnown RBP13.73□□□□□ -0.21
TUBD1-202ENST00000340993 CTHP32929 405 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 OGDHQ02218 1023 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 MESP2Q0VG99 397 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 MAMLD1Q13495 774 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 CCDC14Q49A88 953 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 Q6ZNB5 142 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 CIR1Q86X95 450 aaPredicted RBP13.73□□□□□ -0.21
TUBD1-202ENST00000340993 CFAP52Q8N1V2 620 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 TRIM62Q9BVG3 475 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 ZDHHC4Q9NPG8 344 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 C11orf16Q9NQ32 467 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 ANLNQ9NQW6 1124 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SPHK2Q9NRA0 654 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 STAP1Q9ULZ2 295 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 TLR6Q9Y2C9 796 aa13.73□□□□□ -0.21
TUBD1-202ENST00000340993 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms