RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 KRT81Q14533 505 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 TAZQ16635 292 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 CNPY1Q3B7I2 92 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 DLK2Q6UY11 383 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 HPS6Q86YV9 775 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PPP1R14CQ8TAE6 165 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PGBD4Q96DM1 585 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PPCSQ9HAB8 311 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 XAB2Q9HCS7 855 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PCDHGC3Q9UN70 934 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 RPL26L1Q9UNX3 145 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAFBQ9Y5Q3 323 aaPredicted RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 SSC5DA1L4H1 1573 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 INO80B-WBP1J3KQ70 363 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 TXNDC9O14530 226 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 CIB2O75838 187 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 DDNO94850 711 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PGM3O95394 542 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZBED1O96006 694 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 GSRP00390 522 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PIGRP01833 764 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 CDH5P33151 784 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 FASTKD1Q53R41 847 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 CRLF3Q8IUI8 442 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PHTF2Q8N3S3 785 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 STKLD1Q8NE28 680 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 RDM1Q8NG50 284 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PCDH19Q8TAB3 1148 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 INO80BQ9C086 356 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADARB2Q9NS39 739 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 ETNK2Q9NVF9 386 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 ABLIM1O14639 778 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PRKCBP05771 671 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PTPRAP18433 802 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 UBA1P22314 1058 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 SLC10A2Q12908 348 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 MSLNQ13421 630 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 LY6KQ17RY6 165 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 Q3C1V9 767 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 NOL9Q5SY16 702 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 PAOXQ6QHF9 649 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 C1orf127Q8N9H9 656 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 HEXIM2Q96MH2 286 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 ACO2Q99798 780 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 CXCL16Q9H2A7 254 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 MMADHCQ9H3L0 296 aaPredicted RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 RNPEPQ9H4A4 650 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 EMCNQ9ULC0 261 aa12.36□□□□□ -0.43
CCDC144CP-201ENST00000340196 MGAMO43451 1857 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 OPHN1O60890 802 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 APOEP02649 317 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 BPGMP07738 259 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 CCNFP41002 786 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 BACE1P56817 501 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 ASPHQ12797 758 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 STX3Q13277 289 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 TUBB3Q13509 450 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 TNS4Q8IZW8 715 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADAM32Q8TC27 787 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 CLEC4CQ8WTT0 213 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 C12orf42Q96LP6 360 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 C7orf26Q96N11 449 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 AS3MTQ9HBK9 375 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 DNAAF2Q9NVR5 837 aaKnown RBP12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 RLFQ13129 1914 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 TCF7P36402 384 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 BCAR1P56945 870 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 LAMTOR4Q0VGL1 99 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 CCNIQ14094 377 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 N4BP2L1Q5TBK1 243 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 FAM219BQ5XKK7 198 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 NET1Q7Z628 596 aaPredicted RBP12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 SATL1Q86VE3 508 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 RASSF3Q86WH2 238 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF280CQ8ND82 737 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 DEPDC1BQ8WUY9 529 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 WRNIP1Q96S55 665 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 MIS12Q9H081 205 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 TMPRSS4Q9NRS4 437 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 FAM49BQ9NUQ9 324 aa12.35□□□□□ -0.43
CCDC144CP-201ENST00000340196 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms